Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPB2P35606 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COPB2P35606 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPB2P35606 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.98■□□□□ 0.79
COPB2P35606 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPB2P35606 KRT18P55-202ENST00000578578 1546 ntBASIC19.97■□□□□ 0.79
COPB2P35606 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.97■□□□□ 0.79
COPB2P35606 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COPB2P35606 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPB2P35606 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.97■□□□□ 0.79
COPB2P35606 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COPB2P35606 PTCHD3P3-201ENST00000403073 906 ntBASIC19.97■□□□□ 0.79
COPB2P35606 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.97■□□□□ 0.79
COPB2P35606 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.97■□□□□ 0.79
COPB2P35606 AC096734.2-201ENST00000562054 433 ntBASIC19.97■□□□□ 0.79
COPB2P35606 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.97■□□□□ 0.79
COPB2P35606 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
COPB2P35606 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.97■□□□□ 0.79
COPB2P35606 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPB2P35606 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.97■□□□□ 0.79
COPB2P35606 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.97■□□□□ 0.79
COPB2P35606 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.96■□□□□ 0.79
COPB2P35606 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.96■□□□□ 0.79
COPB2P35606 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.96■□□□□ 0.79
COPB2P35606 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.96■□□□□ 0.79
COPB2P35606 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPB2P35606 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
COPB2P35606 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COPB2P35606 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
COPB2P35606 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COPB2P35606 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
COPB2P35606 AC254562.1-201ENST00000417586 456 ntBASIC19.95■□□□□ 0.78
COPB2P35606 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.95■□□□□ 0.78
COPB2P35606 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 AC018845.2-201ENST00000568326 409 ntBASIC19.95■□□□□ 0.78
COPB2P35606 AC092865.6-201ENST00000642101 219 ntBASIC19.95■□□□□ 0.78
COPB2P35606 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 AL133373.2-201ENST00000623187 2828 ntBASIC19.95■□□□□ 0.78
COPB2P35606 FLJ13224-201ENST00000313737 1514 ntBASIC19.95■□□□□ 0.78
COPB2P35606 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPB2P35606 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.95■□□□□ 0.78
COPB2P35606 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
COPB2P35606 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
COPB2P35606 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
COPB2P35606 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
COPB2P35606 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPB2P35606 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COPB2P35606 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COPB2P35606 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
COPB2P35606 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms