Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 AC135050.7-201ENST00000624508 2218 ntBASIC19.9■□□□□ 0.78
CNGA1P29973 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
CNGA1P29973 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CNGA1P29973 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.9■□□□□ 0.78
CNGA1P29973 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.9■□□□□ 0.78
CNGA1P29973 HCG4B-203ENST00000450128 991 ntBASIC19.9■□□□□ 0.78
CNGA1P29973 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.9■□□□□ 0.78
CNGA1P29973 RPS15P9-201ENST00000494093 319 ntBASIC19.9■□□□□ 0.78
CNGA1P29973 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.9■□□□□ 0.78
CNGA1P29973 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.9■□□□□ 0.78
CNGA1P29973 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.9■□□□□ 0.78
CNGA1P29973 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.9■□□□□ 0.78
CNGA1P29973 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.9■□□□□ 0.78
CNGA1P29973 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.9■□□□□ 0.78
CNGA1P29973 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNGA1P29973 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNGA1P29973 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.9■□□□□ 0.78
CNGA1P29973 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.9■□□□□ 0.78
CNGA1P29973 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CNGA1P29973 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNGA1P29973 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CNGA1P29973 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CNGA1P29973 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNGA1P29973 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CNGA1P29973 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNGA1P29973 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNGA1P29973 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.89■□□□□ 0.77
CNGA1P29973 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 FAM8A3P-201ENST00000427218 844 ntBASIC19.89■□□□□ 0.77
CNGA1P29973 MKNK2P1-201ENST00000437526 628 ntBASIC19.89■□□□□ 0.77
CNGA1P29973 NCF1C-201ENST00000438382 1427 ntBASIC19.89■□□□□ 0.77
CNGA1P29973 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.89■□□□□ 0.77
CNGA1P29973 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNGA1P29973 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.89■□□□□ 0.77
CNGA1P29973 AL096828.2-201ENST00000567259 1965 ntBASIC19.89■□□□□ 0.77
CNGA1P29973 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.89■□□□□ 0.77
CNGA1P29973 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.89■□□□□ 0.77
CNGA1P29973 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.89■□□□□ 0.77
CNGA1P29973 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.89■□□□□ 0.77
CNGA1P29973 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.88■□□□□ 0.77
CNGA1P29973 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNGA1P29973 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 AC148477.5-201ENST00000625164 1645 ntBASIC19.88■□□□□ 0.77
CNGA1P29973 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CNGA1P29973 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 COX5BP2-201ENST00000392354 334 ntBASIC19.88■□□□□ 0.77
CNGA1P29973 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.88■□□□□ 0.77
CNGA1P29973 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.88■□□□□ 0.77
CNGA1P29973 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.88■□□□□ 0.77
CNGA1P29973 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.88■□□□□ 0.77
CNGA1P29973 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.88■□□□□ 0.77
CNGA1P29973 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.88■□□□□ 0.77
CNGA1P29973 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.88■□□□□ 0.77
CNGA1P29973 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.88■□□□□ 0.77
CNGA1P29973 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.88■□□□□ 0.77
CNGA1P29973 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNGA1P29973 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNGA1P29973 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.87■□□□□ 0.77
CNGA1P29973 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.87■□□□□ 0.77
CNGA1P29973 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CNGA1P29973 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNGA1P29973 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms