Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 AL136116.3-201ENST00000402907 1138 ntBASIC11.83□□□□□ -0.52
SNCGO76070 GUSBP5-201ENST00000418136 578 ntBASIC11.83□□□□□ -0.52
SNCGO76070 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC11.83□□□□□ -0.52
SNCGO76070 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.83□□□□□ -0.52
SNCGO76070 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.83□□□□□ -0.52
SNCGO76070 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SNCGO76070 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SNCGO76070 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SNCGO76070 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 PTENP1-202ENST00000532280 3996 ntBASIC11.83□□□□□ -0.52
SNCGO76070 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC11.83□□□□□ -0.52
SNCGO76070 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SNCGO76070 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
SNCGO76070 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNCGO76070 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SNCGO76070 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 EDA-201ENST00000338901 1233 ntBASIC11.82□□□□□ -0.52
SNCGO76070 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC11.82□□□□□ -0.52
SNCGO76070 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC11.82□□□□□ -0.52
SNCGO76070 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.82□□□□□ -0.52
SNCGO76070 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.82□□□□□ -0.52
SNCGO76070 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNCGO76070 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.81□□□□□ -0.52
SNCGO76070 LYSMD4-203ENST00000378904 2122 ntBASIC11.81□□□□□ -0.52
SNCGO76070 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.81□□□□□ -0.52
SNCGO76070 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
SNCGO76070 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.81□□□□□ -0.52
SNCGO76070 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
SNCGO76070 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNCGO76070 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms