Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 MIR4281-201ENST00000580852 62 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 LINC01230-201ENST00000625222 3017 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 AL603832.2-201ENST00000566195 2125 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 DUX4L29-201ENST00000425409 679 ntBASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 AC063926.3-201ENST00000624734 5658 ntBASIC10.11□□□□□ -0.79
CYSTM1Q9H1C7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms