Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AC139530.3-201ENST00000620344 690 ntBASIC18.52■□□□□ 0.56
SUSD3Q96L08 AC004790.2-201ENST00000623588 572 ntBASIC18.52■□□□□ 0.56
SUSD3Q96L08 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.52■□□□□ 0.56
SUSD3Q96L08 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.52■□□□□ 0.56
SUSD3Q96L08 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUSD3Q96L08 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 AL590787.1-201ENST00000568856 1315 ntBASIC18.51■□□□□ 0.55
SUSD3Q96L08 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 VN2R19P-201ENST00000442399 1052 ntBASIC18.51■□□□□ 0.55
SUSD3Q96L08 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 MIR4751-201ENST00000578027 74 ntBASIC18.51■□□□□ 0.55
SUSD3Q96L08 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUSD3Q96L08 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.51■□□□□ 0.55
SUSD3Q96L08 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 KRT18P2-201ENST00000447938 1258 ntBASIC18.5■□□□□ 0.55
SUSD3Q96L08 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 HCG4B-203ENST00000450128 991 ntBASIC18.5■□□□□ 0.55
SUSD3Q96L08 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 GGTLC5P-201ENST00000617623 998 ntBASIC18.5■□□□□ 0.55
SUSD3Q96L08 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 AL390961.4-201ENST00000623958 2535 ntBASIC18.5■□□□□ 0.55
SUSD3Q96L08 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUSD3Q96L08 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.5■□□□□ 0.55
SUSD3Q96L08 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 AC004832.2-201ENST00000426397 482 ntBASIC18.49■□□□□ 0.55
SUSD3Q96L08 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms