Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 AC008040.2-201ENST00000461049 708 ntBASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ERCC6LQ2NKX8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 AC022898.2-201ENST00000616822 1312 ntBASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.61■□□□□ 0.57
ERCC6LQ2NKX8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 LINC02012-201ENST00000608206 1725 ntBASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ERCC6LQ2NKX8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC6LQ2NKX8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC6LQ2NKX8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ERCC6LQ2NKX8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC6LQ2NKX8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ERCC6LQ2NKX8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms