Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA1P02708 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA1P02708 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHRNA1P02708 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA1P02708 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA1P02708 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA1P02708 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA1P02708 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA1P02708 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA1P02708 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.99■□□□□ 0.63
CHRNA1P02708 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA1P02708 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA1P02708 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA1P02708 AC023141.13-201ENST00000604991 943 ntBASIC18.99■□□□□ 0.63
CHRNA1P02708 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA1P02708 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA1P02708 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 AC138028.4-201ENST00000564984 1845 ntBASIC18.99■□□□□ 0.63
CHRNA1P02708 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA1P02708 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHRNA1P02708 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA1P02708 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.98■□□□□ 0.63
CHRNA1P02708 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 CXCL1P1-201ENST00000502804 216 ntBASIC18.98■□□□□ 0.63
CHRNA1P02708 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA1P02708 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA1P02708 AC007064.4-201ENST00000637740 555 ntBASIC18.98■□□□□ 0.63
CHRNA1P02708 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA1P02708 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA1P02708 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA1P02708 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 AC046185.3-201ENST00000623228 1824 ntBASIC18.97■□□□□ 0.63
CHRNA1P02708 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 FAM58CP-201ENST00000435741 640 ntBASIC18.97■□□□□ 0.63
CHRNA1P02708 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.97■□□□□ 0.63
CHRNA1P02708 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.97■□□□□ 0.63
CHRNA1P02708 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.97■□□□□ 0.63
CHRNA1P02708 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.97■□□□□ 0.63
CHRNA1P02708 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHRNA1P02708 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.97■□□□□ 0.63
CHRNA1P02708 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA1P02708 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA1P02708 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHRNA1P02708 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA1P02708 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA1P02708 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms