Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 BX276092.7-203ENST00000637198 1536 ntBASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 AL645608.8-201ENST00000606034 2086 ntBASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.8□□□□□ -0.04
KCNIP1Q9NZI2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 HOMER2P1-201ENST00000455653 964 ntBASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 YBX1P2-201ENST00000489612 999 ntBASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP1Q9NZI2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 AL359075.1-203ENST00000462729 1002 ntBASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 AC112698.1-201ENST00000510299 916 ntBASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP1Q9NZI2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms