Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 XPO7-206ENST00000519769 590 ntTSL 37.52□□□□□ -1.212e-6■■□□□ 13
CSTF2TQ9H0L4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.95□□□□□ -1.37e-7■■□□□ 13
CSTF2TQ9H0L4 INTS6-212ENST00000485178 474 ntTSL 55.29□□□□□ -1.567e-7■■□□□ 13
CSTF2TQ9H0L4 XPO7-208ENST00000521303 569 ntTSL 55.2□□□□□ -1.582e-6■■□□□ 13
CSTF2TQ9H0L4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-7■■□□□ 13
CSTF2TQ9H0L4 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.31□□□□□ -0.442e-7■■□□□ 13
CSTF2TQ9H0L4 PER1-203ENST00000577253 589 ntTSL 419.55■□□□□ 0.722e-6■■□□□ 13
CSTF2TQ9H0L4 PER1-212ENST00000581395 3209 ntTSL 214.54□□□□□ -0.082e-6■■□□□ 13
CSTF2TQ9H0L4 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.45□□□□□ -0.422e-6■■□□□ 13
CSTF2TQ9H0L4 PER1-217ENST00000584202 576 ntTSL 511.24□□□□□ -0.612e-6■■□□□ 13
CSTF2TQ9H0L4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.742e-6■■□□□ 13
CSTF2TQ9H0L4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.53■□□□□ 0.242e-6■■□□□ 13
CSTF2TQ9H0L4 KCNN4-205ENST00000599720 983 ntTSL 516.36■□□□□ 0.212e-6■■□□□ 13
CSTF2TQ9H0L4 CLTC-213ENST00000584313 715 ntTSL 313.46□□□□□ -0.257e-10■■□□□ 13
CSTF2TQ9H0L4 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.86□□□□□ -0.517e-10■■□□□ 13
CSTF2TQ9H0L4 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.617e-10■■□□□ 13
CSTF2TQ9H0L4 CLTC-212ENST00000580081 575 ntTSL 47.93□□□□□ -1.147e-10■■□□□ 13
CSTF2TQ9H0L4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.197e-10■■□□□ 13
CSTF2TQ9H0L4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.83□□□□□ -1.327e-10■■□□□ 13
CSTF2TQ9H0L4 ZYX-210ENST00000497119 560 ntTSL 214.79□□□□□ -0.043e-6■■□□□ 13
CSTF2TQ9H0L4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.722e-6■■□□□ 13
CSTF2TQ9H0L4 CLN6-224ENST00000638076 2323 ntTSL 1 (best)19.45■□□□□ 0.72e-6■■□□□ 13
CSTF2TQ9H0L4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.066e-7■■□□□ 13
CSTF2TQ9H0L4 DNAJC5-202ENST00000470551 5287 ntTSL 213.53□□□□□ -0.246e-7■■□□□ 13
CSTF2TQ9H0L4 RAB43-206ENST00000457077 574 ntTSL 417.01■□□□□ 0.311e-7■■□□□ 12.9
CSTF2TQ9H0L4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.311e-7■■□□□ 12.9
CSTF2TQ9H0L4 ACTN1-217ENST00000556203 564 ntTSL 314.19□□□□□ -0.145e-7■■□□□ 12.9
CSTF2TQ9H0L4 TBCD-205ENST00000571618 775 ntTSL 310.22□□□□□ -0.776e-8■■□□□ 12.9
CSTF2TQ9H0L4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.811e-6■■□□□ 12.9
CSTF2TQ9H0L4 CPE-203ENST00000480404 437 ntTSL 217.89■□□□□ 0.451e-6■■□□□ 12.9
CSTF2TQ9H0L4 CPE-205ENST00000513982 564 ntTSL 47.47□□□□□ -1.211e-6■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-219ENST00000542099 1119 ntTSL 322.15■■□□□ 1.142e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.952e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)20.83■□□□□ 0.932e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.892e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.72e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.62e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARF3-204ENST00000485410 563 ntTSL 318.14■□□□□ 0.493e-12■■□□□ 12.9
CSTF2TQ9H0L4 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.53e-12■■□□□ 12.9
CSTF2TQ9H0L4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.882e-7■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-211ENST00000582648 1013 ntTSL 516.86■□□□□ 0.292e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.9■□□□□ 0.142e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-212ENST00000582788 2004 ntTSL 515.84■□□□□ 0.132e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-222ENST00000584908 1316 ntTSL 1 (best)15.12■□□□□ 0.012e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.37□□□□□ -0.432e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC11.57□□□□□ -0.562e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.52□□□□□ -0.562e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.582e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)11.27□□□□□ -0.62e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC10.93□□□□□ -0.662e-6■■□□□ 12.9
CSTF2TQ9H0L4 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC10.68□□□□□ -0.72e-6■■□□□ 12.9
CSTF2TQ9H0L4 CLMN-202ENST00000553733 565 ntTSL 417.14■□□□□ 0.331e-6■■□□□ 12.9
CSTF2TQ9H0L4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.471e-6■■□□□ 12.9
CSTF2TQ9H0L4 ACSF2-224ENST00000513544 497 ntTSL 516.17■□□□□ 0.183e-7■■□□□ 12.9
CSTF2TQ9H0L4 SHANK2-213ENST00000460048 736 ntTSL 515.45■□□□□ 0.062e-6■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.412e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.062e-9■■□□□ 12.9
CSTF2TQ9H0L4 ARL6IP4-206ENST00000413381 799 ntAPPRIS ALT2 TSL 512.36□□□□□ -0.432e-9■■□□□ 12.9
CSTF2TQ9H0L4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.396e-9■■□□□ 12.9
CSTF2TQ9H0L4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.026e-9■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.126e-10■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-203ENST00000562209 624 ntTSL 518.38■□□□□ 0.536e-10■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.156e-10■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-202ENST00000561972 464 ntTSL 314.8□□□□□ -0.046e-10■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.04□□□□□ -0.166e-10■■□□□ 12.9
CSTF2TQ9H0L4 CYBA-207ENST00000566534 1006 ntTSL 512.93□□□□□ -0.346e-10■■□□□ 12.9
CSTF2TQ9H0L4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.88□□□□□ -0.033e-10■■□□□ 12.9
CSTF2TQ9H0L4 TEX22-202ENST00000548638 508 ntTSL 511.11□□□□□ -0.633e-7■■□□□ 12.9
CSTF2TQ9H0L4 SHANK2-209ENST00000445654 522 ntTSL 313.4□□□□□ -0.262e-6■■□□□ 12.9
CSTF2TQ9H0L4 ZNF362-203ENST00000483388 712 ntTSL 221.74■■□□□ 1.071e-12■■□□□ 12.9
CSTF2TQ9H0L4 PRKCZ-212ENST00000471018 716 ntTSL 316.07■□□□□ 0.166e-8■■□□□ 12.9
CSTF2TQ9H0L4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.31e-12■■□□□ 12.9
CSTF2TQ9H0L4 L3MBTL1-213ENST00000471977 318 ntTSL 39.17□□□□□ -0.949e-7■■□□□ 12.9
CSTF2TQ9H0L4 L3MBTL1-205ENST00000422861 4322 ntAPPRIS ALT2 TSL 28.67□□□□□ -1.029e-7■■□□□ 12.9
CSTF2TQ9H0L4 ZNF362-204ENST00000490959 197 ntTSL 58.59□□□□□ -1.031e-12■■□□□ 12.9
CSTF2TQ9H0L4 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.119e-7■■□□□ 12.9
CSTF2TQ9H0L4 AP2A2-216ENST00000529438 572 ntTSL 416.56■□□□□ 0.242e-6■■□□□ 12.9
CSTF2TQ9H0L4 ARHGEF10L-205ENST00000466782 482 ntTSL 39.07□□□□□ -0.962e-7■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-215ENST00000514093 842 ntTSL 519.45■□□□□ 0.78e-9■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-204ENST00000453046 572 ntTSL 416.97■□□□□ 0.317e-10■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-209ENST00000504627 602 ntTSL 516.97■□□□□ 0.317e-10■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-212ENST00000508284 578 ntTSL 416.97■□□□□ 0.317e-10■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.287e-10■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-208ENST00000486652 2867 ntTSL 1 (best)15.52■□□□□ 0.083e-6■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.72□□□□□ -0.057e-10■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-205ENST00000464493 532 ntTSL 413.49□□□□□ -0.257e-10■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.393e-6■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-207ENST00000481335 562 ntTSL 411.45□□□□□ -0.587e-10■■□□□ 12.9
CSTF2TQ9H0L4 SQSTM1-203ENST00000422245 628 ntTSL 410.92□□□□□ -0.667e-10■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-202ENST00000443112 1306 ntTSL 1 (best)7.06□□□□□ -1.283e-6■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-203ENST00000445239 784 ntTSL 56.85□□□□□ -1.313e-6■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-204ENST00000477425 529 ntTSL 35.56□□□□□ -1.523e-6■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-206ENST00000479778 2552 ntTSL 24.59□□□□□ -1.673e-6■■□□□ 12.9
CSTF2TQ9H0L4 WDR26-209ENST00000489825 751 ntTSL 53.8□□□□□ -1.83e-6■■□□□ 12.9
CSTF2TQ9H0L4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.88■■□□□ 1.413e-6■■□□□ 12.9
CSTF2TQ9H0L4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.44■■□□□ 1.343e-6■■□□□ 12.9
CSTF2TQ9H0L4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.363e-6■■□□□ 12.9
CSTF2TQ9H0L4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.343e-6■■□□□ 12.9
CSTF2TQ9H0L4 HS6ST1-202ENST00000463963 584 ntTSL 213.82□□□□□ -0.24e-7■■□□□ 12.9
CSTF2TQ9H0L4 CPLX2-207ENST00000514150 970 ntTSL 418.9■□□□□ 0.622e-7■■□□□ 12.9
Retrieved 100 of 19,151 protein–RNA pairs in 154.2 ms