RNA–Protein interactions for RNA: ENST00000463963.1

HS6ST1-202, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 2

Gene HS6ST1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-202ENST00000463963 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
HS6ST1-202ENST00000463963 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
HS6ST1-202ENST00000463963 ABCC9O60706 1549 aa32.53■■■□□ 2.8
HS6ST1-202ENST00000463963 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
HS6ST1-202ENST00000463963 NACADO15069 1562 aa30.78■■■□□ 2.52
HS6ST1-202ENST00000463963 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
HS6ST1-202ENST00000463963 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
HS6ST1-202ENST00000463963 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
HS6ST1-202ENST00000463963 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
HS6ST1-202ENST00000463963 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
HS6ST1-202ENST00000463963 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
HS6ST1-202ENST00000463963 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
HS6ST1-202ENST00000463963 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
HS6ST1-202ENST00000463963 SCRIBQ14160 1630 aa29.72■■■□□ 2.35
HS6ST1-202ENST00000463963 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
HS6ST1-202ENST00000463963 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
HS6ST1-202ENST00000463963 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
HS6ST1-202ENST00000463963 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
HS6ST1-202ENST00000463963 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
HS6ST1-202ENST00000463963 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
HS6ST1-202ENST00000463963 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
HS6ST1-202ENST00000463963 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
HS6ST1-202ENST00000463963 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
HS6ST1-202ENST00000463963 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
HS6ST1-202ENST00000463963 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
HS6ST1-202ENST00000463963 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
HS6ST1-202ENST00000463963 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
HS6ST1-202ENST00000463963 CUX2O14529 1486 aa28.01■■■□□ 2.07
HS6ST1-202ENST00000463963 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
HS6ST1-202ENST00000463963 NESP48681 1621 aa27.97■■■□□ 2.07
HS6ST1-202ENST00000463963 DNAJC5Q9H3Z4 198 aa27.91■■■□□ 2.06
HS6ST1-202ENST00000463963 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
HS6ST1-202ENST00000463963 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
HS6ST1-202ENST00000463963 WIZO95785 1651 aa27.67■■■□□ 2.02
HS6ST1-202ENST00000463963 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
HS6ST1-202ENST00000463963 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
HS6ST1-202ENST00000463963 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
HS6ST1-202ENST00000463963 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
HS6ST1-202ENST00000463963 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
HS6ST1-202ENST00000463963 TOP2AP11388 1531 aaKnown RBP27.32■■□□□ 1.96
HS6ST1-202ENST00000463963 WDR62O43379 1518 aa27.31■■□□□ 1.96
HS6ST1-202ENST00000463963 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
HS6ST1-202ENST00000463963 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
HS6ST1-202ENST00000463963 CFTRP13569 1480 aa27.23■■□□□ 1.95
HS6ST1-202ENST00000463963 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
HS6ST1-202ENST00000463963 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
HS6ST1-202ENST00000463963 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
HS6ST1-202ENST00000463963 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
HS6ST1-202ENST00000463963 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
HS6ST1-202ENST00000463963 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
HS6ST1-202ENST00000463963 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
HS6ST1-202ENST00000463963 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
HS6ST1-202ENST00000463963 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
HS6ST1-202ENST00000463963 DNMBPQ6XZF7 1577 aa26.66■■□□□ 1.86
HS6ST1-202ENST00000463963 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
HS6ST1-202ENST00000463963 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
HS6ST1-202ENST00000463963 POLA1P09884 1462 aaPredicted RBP26.46■■□□□ 1.83
HS6ST1-202ENST00000463963 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.824e-8■■■■■ 31.9
HS6ST1-202ENST00000463963 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
HS6ST1-202ENST00000463963 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
HS6ST1-202ENST00000463963 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
HS6ST1-202ENST00000463963 CHD1O14646 1710 aa26.36■■□□□ 1.81
HS6ST1-202ENST00000463963 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
HS6ST1-202ENST00000463963 SOGA1O94964 1423 aa26.35■■□□□ 1.81
HS6ST1-202ENST00000463963 FGD5Q6ZNL6 1462 aa26.32■■□□□ 1.8
HS6ST1-202ENST00000463963 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
HS6ST1-202ENST00000463963 CUX1P39880 1505 aa26.29■■□□□ 1.8
HS6ST1-202ENST00000463963 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
HS6ST1-202ENST00000463963 FBLN2P98095 1184 aa26.29■■□□□ 1.8
HS6ST1-202ENST00000463963 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
HS6ST1-202ENST00000463963 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
HS6ST1-202ENST00000463963 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
HS6ST1-202ENST00000463963 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
HS6ST1-202ENST00000463963 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
HS6ST1-202ENST00000463963 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
HS6ST1-202ENST00000463963 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
HS6ST1-202ENST00000463963 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
HS6ST1-202ENST00000463963 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
HS6ST1-202ENST00000463963 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
HS6ST1-202ENST00000463963 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
HS6ST1-202ENST00000463963 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
HS6ST1-202ENST00000463963 SYNJ2O15056 1496 aa26.03■■□□□ 1.76
HS6ST1-202ENST00000463963 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
HS6ST1-202ENST00000463963 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
HS6ST1-202ENST00000463963 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
HS6ST1-202ENST00000463963 BIVM-ERCC5R4GMW8 1640 aa25.91■■□□□ 1.74
HS6ST1-202ENST00000463963 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
HS6ST1-202ENST00000463963 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
HS6ST1-202ENST00000463963 ADAMTS12P58397 1594 aa25.79■■□□□ 1.72
HS6ST1-202ENST00000463963 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
HS6ST1-202ENST00000463963 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
HS6ST1-202ENST00000463963 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
HS6ST1-202ENST00000463963 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
HS6ST1-202ENST00000463963 NUP160Q12769 1436 aa25.68■■□□□ 1.7
HS6ST1-202ENST00000463963 ERCC6L2Q5T890 1561 aa25.68■■□□□ 1.7
HS6ST1-202ENST00000463963 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
HS6ST1-202ENST00000463963 PRG4Q92954 1404 aaPredicted RBP25.44■■□□□ 1.66
HS6ST1-202ENST00000463963 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
HS6ST1-202ENST00000463963 JPH4Q96JJ6 628 aa25.42■■□□□ 1.66
HS6ST1-202ENST00000463963 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms