RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 NISCHQ9Y2I1 1504 aa45.75■■■■■ 4.91
CLMN-202ENST00000553733 CCDC180Q9P1Z9 1646 aa41.09■■■■■ 4.17
CLMN-202ENST00000553733 ABCC9O60706 1549 aa40.58■■■■■ 4.09
CLMN-202ENST00000553733 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
CLMN-202ENST00000553733 NACADO15069 1562 aa38.61■■■■□ 3.77
CLMN-202ENST00000553733 UNC13AQ9UPW8 1703 aa38.24■■■■□ 3.71
CLMN-202ENST00000553733 MYO15BQ96JP2 1530 aa38.2■■■■□ 3.71
CLMN-202ENST00000553733 DCAF8L2P0C7V8 631 aa38.14■■■■□ 3.7
CLMN-202ENST00000553733 ZCCHC6Q5VYS8 1495 aaKnown RBP38.06■■■■□ 3.68
CLMN-202ENST00000553733 DCAF1Q9Y4B6 1507 aa37.83■■■■□ 3.65
CLMN-202ENST00000553733 BICRAQ9NZM4 1560 aa37.79■■■■□ 3.64
CLMN-202ENST00000553733 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
CLMN-202ENST00000553733 PABPN1Q86U42 306 aaKnown RBP eCLIP37.69■■■■□ 3.62
CLMN-202ENST00000553733 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
CLMN-202ENST00000553733 SHROOM4Q9ULL8 1493 aa37.2■■■■□ 3.55
CLMN-202ENST00000553733 CC2D2AQ9P2K1 1620 aa36.78■■■■□ 3.48
CLMN-202ENST00000553733 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
CLMN-202ENST00000553733 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
CLMN-202ENST00000553733 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
CLMN-202ENST00000553733 NCAPD3P42695 1498 aa35.58■■■■□ 3.29
CLMN-202ENST00000553733 ATAD2BQ9ULI0 1458 aa35.55■■■■□ 3.28
CLMN-202ENST00000553733 BAZ1AQ9NRL2 1556 aaPredicted RBP35.5■■■■□ 3.27
CLMN-202ENST00000553733 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
CLMN-202ENST00000553733 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
CLMN-202ENST00000553733 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
CLMN-202ENST00000553733 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
CLMN-202ENST00000553733 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
CLMN-202ENST00000553733 NESP48681 1621 aa35.02■■■■□ 3.2
CLMN-202ENST00000553733 WIZO95785 1651 aa34.96■■■■□ 3.19
CLMN-202ENST00000553733 ERCC6Q03468 1493 aa34.96■■■■□ 3.19
CLMN-202ENST00000553733 CUX2O14529 1486 aa34.84■■■■□ 3.17
CLMN-202ENST00000553733 LAMC3Q9Y6N6 1575 aa34.82■■■■□ 3.16
CLMN-202ENST00000553733 KIF21AQ7Z4S6 1674 aa34.74■■■■□ 3.15
CLMN-202ENST00000553733 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
CLMN-202ENST00000553733 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
CLMN-202ENST00000553733 TOP2AP11388 1531 aaKnown RBP34.49■■■■□ 3.11
CLMN-202ENST00000553733 CADPSQ9ULU8 1353 aa34.46■■■■□ 3.11
CLMN-202ENST00000553733 PDS5BQ9NTI5 1447 aa34.44■■■■□ 3.1
CLMN-202ENST00000553733 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
CLMN-202ENST00000553733 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
CLMN-202ENST00000553733 WDR62O43379 1518 aa34.25■■■■□ 3.07
CLMN-202ENST00000553733 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
CLMN-202ENST00000553733 CFTRP13569 1480 aa34.21■■■■□ 3.07
CLMN-202ENST00000553733 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
CLMN-202ENST00000553733 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
CLMN-202ENST00000553733 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
CLMN-202ENST00000553733 URB2Q14146 1524 aaKnown RBP33.92■■■■□ 3.02
CLMN-202ENST00000553733 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
CLMN-202ENST00000553733 DNMBPQ6XZF7 1577 aa33.52■■■□□ 2.96
CLMN-202ENST00000553733 IFT140Q96RY7 1462 aa33.44■■■□□ 2.94
CLMN-202ENST00000553733 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
CLMN-202ENST00000553733 ABCC8Q09428 1581 aa33.4■■■□□ 2.94
CLMN-202ENST00000553733 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
CLMN-202ENST00000553733 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
CLMN-202ENST00000553733 POLA1P09884 1462 aaPredicted RBP33.26■■■□□ 2.92
CLMN-202ENST00000553733 CUX1P39880 1505 aa33.15■■■□□ 2.9
CLMN-202ENST00000553733 CHD1O14646 1710 aa33.14■■■□□ 2.89
CLMN-202ENST00000553733 RAD54L2Q9Y4B4 1467 aa33.1■■■□□ 2.89
CLMN-202ENST00000553733 SUPT5HO00267 1087 aaKnown RBP33.09■■■□□ 2.89
CLMN-202ENST00000553733 FGD5Q6ZNL6 1462 aa33.09■■■□□ 2.89
CLMN-202ENST00000553733 OSCARQ8IYS5 282 aa33.08■■■□□ 2.89
CLMN-202ENST00000553733 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.88
CLMN-202ENST00000553733 WDR97A6NE52 1622 aa33.07■■■□□ 2.88
CLMN-202ENST00000553733 SOGA1O94964 1423 aa32.96■■■□□ 2.87
CLMN-202ENST00000553733 RIMBP3CA6NJZ7 1639 aa32.96■■■□□ 2.87
CLMN-202ENST00000553733 RIMBP3BA6NNM3 1639 aa32.96■■■□□ 2.87
CLMN-202ENST00000553733 RIMBP3Q9UFD9 1639 aa32.96■■■□□ 2.87
CLMN-202ENST00000553733 TRIM41Q8WV44 630 aa32.9■■■□□ 2.86
CLMN-202ENST00000553733 TDRD9Q8NDG6 1382 aaKnown RBP32.87■■■□□ 2.85
CLMN-202ENST00000553733 PBRM1Q86U86 1689 aa32.87■■■□□ 2.85
CLMN-202ENST00000553733 ARHGEF11O15085 1522 aa32.82■■■□□ 2.85
CLMN-202ENST00000553733 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
CLMN-202ENST00000553733 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
CLMN-202ENST00000553733 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
CLMN-202ENST00000553733 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
CLMN-202ENST00000553733 TOP2BQ02880 1626 aa32.73■■■□□ 2.83
CLMN-202ENST00000553733 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
CLMN-202ENST00000553733 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
CLMN-202ENST00000553733 GRIN2BQ13224 1484 aa32.71■■■□□ 2.83
CLMN-202ENST00000553733 CLASP1Q7Z460 1538 aa32.67■■■□□ 2.82
CLMN-202ENST00000553733 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
CLMN-202ENST00000553733 FBLN2P98095 1184 aa32.61■■■□□ 2.81
CLMN-202ENST00000553733 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
CLMN-202ENST00000553733 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
CLMN-202ENST00000553733 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
CLMN-202ENST00000553733 ADAMTS12P58397 1594 aa32.5■■■□□ 2.79
CLMN-202ENST00000553733 CHMP7Q8WUX9 453 aaPredicted RBP32.43■■■□□ 2.78
CLMN-202ENST00000553733 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
CLMN-202ENST00000553733 CEP170Q5SW79 1584 aa32.32■■■□□ 2.77
CLMN-202ENST00000553733 ERICH3Q5RHP9 1530 aa32.32■■■□□ 2.76
CLMN-202ENST00000553733 CYB5RLQ6IPT4 315 aa32.31■■■□□ 2.76
CLMN-202ENST00000553733 NUP160Q12769 1436 aa32.24■■■□□ 2.75
CLMN-202ENST00000553733 FHAD1B1AJZ9 1412 aa32.22■■■□□ 2.75
CLMN-202ENST00000553733 SHROOM2Q13796 1616 aa32.19■■■□□ 2.74
CLMN-202ENST00000553733 ERCC6L2Q5T890 1561 aa32.19■■■□□ 2.74
CLMN-202ENST00000553733 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
CLMN-202ENST00000553733 CUL7Q14999 1698 aa31.99■■■□□ 2.71
CLMN-202ENST00000553733 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
CLMN-202ENST00000553733 IGF1RP08069 1367 aa31.85■■■□□ 2.69
CLMN-202ENST00000553733 PRG4Q92954 1404 aaPredicted RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms