RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 NISCHQ9Y2I1 1504 aa40.75■■■■■ 4.11
SHANK2-213ENST00000460048 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
SHANK2-213ENST00000460048 ABCC9O60706 1549 aa35.83■■■■□ 3.33
SHANK2-213ENST00000460048 RB1CC1Q8TDY2 1594 aa34.38■■■■□ 3.09
SHANK2-213ENST00000460048 NACADO15069 1562 aa34.27■■■■□ 3.08
SHANK2-213ENST00000460048 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
SHANK2-213ENST00000460048 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
SHANK2-213ENST00000460048 ZCCHC6Q5VYS8 1495 aaKnown RBP33.89■■■■□ 3.02
SHANK2-213ENST00000460048 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
SHANK2-213ENST00000460048 UNC13AQ9UPW8 1703 aa33.72■■■□□ 2.99
SHANK2-213ENST00000460048 BICRAQ9NZM4 1560 aa33.39■■■□□ 2.94
SHANK2-213ENST00000460048 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
SHANK2-213ENST00000460048 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
SHANK2-213ENST00000460048 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
SHANK2-213ENST00000460048 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
SHANK2-213ENST00000460048 EIF4G1Q04637 1599 aaKnown RBP32.5■■■□□ 2.79
SHANK2-213ENST00000460048 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
SHANK2-213ENST00000460048 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
SHANK2-213ENST00000460048 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
SHANK2-213ENST00000460048 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
SHANK2-213ENST00000460048 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
SHANK2-213ENST00000460048 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
SHANK2-213ENST00000460048 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
SHANK2-213ENST00000460048 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
SHANK2-213ENST00000460048 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
SHANK2-213ENST00000460048 MROH2BQ7Z745 1585 aa31.4■■■□□ 2.62
SHANK2-213ENST00000460048 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
SHANK2-213ENST00000460048 WIZO95785 1651 aa31.08■■■□□ 2.57
SHANK2-213ENST00000460048 NESP48681 1621 aa30.95■■■□□ 2.54
SHANK2-213ENST00000460048 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
SHANK2-213ENST00000460048 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
SHANK2-213ENST00000460048 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
SHANK2-213ENST00000460048 CUX2O14529 1486 aa30.71■■■□□ 2.51
SHANK2-213ENST00000460048 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
SHANK2-213ENST00000460048 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
SHANK2-213ENST00000460048 KIF21AQ7Z4S6 1674 aa30.64■■■□□ 2.5
SHANK2-213ENST00000460048 THOC2Q8NI27 1593 aaKnown RBP30.59■■■□□ 2.49
SHANK2-213ENST00000460048 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
SHANK2-213ENST00000460048 CFTRP13569 1480 aa30.43■■■□□ 2.46
SHANK2-213ENST00000460048 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
SHANK2-213ENST00000460048 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
SHANK2-213ENST00000460048 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
SHANK2-213ENST00000460048 PRDM2Q13029 1718 aa30.29■■■□□ 2.44
SHANK2-213ENST00000460048 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
SHANK2-213ENST00000460048 WDR62O43379 1518 aa30.27■■■□□ 2.44
SHANK2-213ENST00000460048 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
SHANK2-213ENST00000460048 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
SHANK2-213ENST00000460048 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
SHANK2-213ENST00000460048 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
SHANK2-213ENST00000460048 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
SHANK2-213ENST00000460048 DNMBPQ6XZF7 1577 aa29.75■■■□□ 2.35
SHANK2-213ENST00000460048 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
SHANK2-213ENST00000460048 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
SHANK2-213ENST00000460048 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
SHANK2-213ENST00000460048 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
SHANK2-213ENST00000460048 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
SHANK2-213ENST00000460048 CUX1P39880 1505 aa29.47■■■□□ 2.31
SHANK2-213ENST00000460048 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
SHANK2-213ENST00000460048 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
SHANK2-213ENST00000460048 SOGA1O94964 1423 aa29.37■■■□□ 2.29
SHANK2-213ENST00000460048 AQRO60306 1485 aaKnown RBP eCLIP29.35■■■□□ 2.294e-8■■■■■ 31.9
SHANK2-213ENST00000460048 OSCARQ8IYS5 282 aa29.34■■■□□ 2.29
SHANK2-213ENST00000460048 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
SHANK2-213ENST00000460048 TDRD9Q8NDG6 1382 aaKnown RBP29.23■■■□□ 2.27
SHANK2-213ENST00000460048 CHD1O14646 1710 aa29.2■■■□□ 2.27
SHANK2-213ENST00000460048 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
SHANK2-213ENST00000460048 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
SHANK2-213ENST00000460048 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
SHANK2-213ENST00000460048 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
SHANK2-213ENST00000460048 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
SHANK2-213ENST00000460048 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
SHANK2-213ENST00000460048 GRIN2BQ13224 1484 aa29.08■■■□□ 2.25
SHANK2-213ENST00000460048 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
SHANK2-213ENST00000460048 ABCA5Q8WWZ7 1642 aa29.07■■■□□ 2.24
SHANK2-213ENST00000460048 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
SHANK2-213ENST00000460048 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
SHANK2-213ENST00000460048 FBLN2P98095 1184 aa28.99■■■□□ 2.23
SHANK2-213ENST00000460048 RIMBP3CA6NJZ7 1639 aa28.98■■■□□ 2.23
SHANK2-213ENST00000460048 RIMBP3BA6NNM3 1639 aa28.98■■■□□ 2.23
SHANK2-213ENST00000460048 RIMBP3Q9UFD9 1639 aa28.98■■■□□ 2.23
SHANK2-213ENST00000460048 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
SHANK2-213ENST00000460048 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
SHANK2-213ENST00000460048 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
SHANK2-213ENST00000460048 CHMP7Q8WUX9 453 aaPredicted RBP28.89■■■□□ 2.22
SHANK2-213ENST00000460048 CLASP1Q7Z460 1538 aa28.85■■■□□ 2.21
SHANK2-213ENST00000460048 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
SHANK2-213ENST00000460048 ERICH3Q5RHP9 1530 aa28.77■■■□□ 2.2
SHANK2-213ENST00000460048 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
SHANK2-213ENST00000460048 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
SHANK2-213ENST00000460048 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
SHANK2-213ENST00000460048 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
SHANK2-213ENST00000460048 NUP160Q12769 1436 aa28.6■■■□□ 2.17
SHANK2-213ENST00000460048 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
SHANK2-213ENST00000460048 KIF27Q86VH2 1401 aa28.54■■■□□ 2.16
SHANK2-213ENST00000460048 SHROOM2Q13796 1616 aa28.48■■■□□ 2.15
SHANK2-213ENST00000460048 IGF1RP08069 1367 aa28.48■■■□□ 2.15
SHANK2-213ENST00000460048 CUL7Q14999 1698 aa28.47■■■□□ 2.15
SHANK2-213ENST00000460048 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
SHANK2-213ENST00000460048 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
SHANK2-213ENST00000460048 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms