Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.18
ERGIC3Q9Y282 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
ERGIC3Q9Y282 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 KRT17P3-201ENST00000420566 1262 ntBASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 NCF1B-203ENST00000435988 1254 ntBASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 GPAT2P1-201ENST00000444924 1672 ntBASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERGIC3Q9Y282 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 KRASP1-201ENST00000407852 552 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AC239809.2-201ENST00000415381 517 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 KSR1P1-201ENST00000446298 240 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AP002982.1-201ENST00000492365 877 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 DUTP2-201ENST00000519164 463 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AC133041.1-202ENST00000642053 222 ntBASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERGIC3Q9Y282 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 HLA-J-201ENST00000462773 1622 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms