Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 CCND3-219ENST00000513956 562 ntTSL 228.18■■■□□ 2.13e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC26.7■■□□□ 1.863e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.72■■□□□ 1.713e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.673e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-204ENST00000414993 727 ntTSL 425.08■■□□□ 1.613e-7■□□□□ 10.7
DROSHAQ9NRR4 IGF2BP1-205ENST00000510023 754 ntTSL 324.41■■□□□ 1.53e-7■□□□□ 10.7
DROSHAQ9NRR4 TCIRG1-208ENST00000529364 868 ntTSL 324.37■■□□□ 1.493e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-206ENST00000502771 544 ntTSL 423.79■■□□□ 1.43e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-216ENST00000511686 576 ntTSL 323.43■■□□□ 1.343e-7■□□□□ 10.7
DROSHAQ9NRR4 IGF2BP1-206ENST00000515586 768 ntTSL 322.29■■□□□ 1.163e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-220ENST00000514382 476 ntTSL 421.56■■□□□ 1.043e-7■□□□□ 10.7
DROSHAQ9NRR4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC19.93■□□□□ 0.783e-7■□□□□ 10.7
DROSHAQ9NRR4 SLC25A23-208ENST00000597307 557 ntTSL 418.7■□□□□ 0.583e-7■□□□□ 10.7
DROSHAQ9NRR4 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC18.54■□□□□ 0.563e-7■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.553e-7■□□□□ 10.7
DROSHAQ9NRR4 PTOV1-216ENST00000601093 522 ntTSL 217.9■□□□□ 0.463e-7■□□□□ 10.7
DROSHAQ9NRR4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.133e-7■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-206ENST00000588860 779 ntTSL 413.08□□□□□ -0.313e-7■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-210ENST00000590061 544 ntTSL 411.07□□□□□ -0.643e-7■□□□□ 10.7
DROSHAQ9NRR4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.873e-7■□□□□ 10.7
DROSHAQ9NRR4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -13e-7■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.353e-7■□□□□ 10.7
DROSHAQ9NRR4 SMAD4-207ENST00000589076 576 ntTSL 52.24□□□□□ -2.053e-7■□□□□ 10.7
DROSHAQ9NRR4 MELTF-205ENST00000473501 2757 ntTSL 229.09■■■□□ 2.253e-6■□□□□ 10.7
DROSHAQ9NRR4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.415e-12■□□□□ 10.7
DROSHAQ9NRR4 EZR-204ENST00000476189 956 ntTSL 318.86■□□□□ 0.615e-12■□□□□ 10.7
DROSHAQ9NRR4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.681e-6■□□□□ 10.7
DROSHAQ9NRR4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.645e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC24.93■■□□□ 1.585e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.01■■□□□ 1.275e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-211ENST00000430901 483 ntTSL 423■■□□□ 1.275e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-208ENST00000409617 700 ntTSL 222.67■■□□□ 1.225e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.15e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.74■■□□□ 1.075e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-212ENST00000445816 2099 ntTSL 321.72■■□□□ 1.075e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-204ENST00000402131 586 ntTSL 2 BASIC20.64■□□□□ 0.895e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-205ENST00000403425 690 ntTSL 2 BASIC19.95■□□□□ 0.785e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-215ENST00000475927 692 ntTSL 219.95■□□□□ 0.785e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-213ENST00000448830 2792 ntTSL 219.44■□□□□ 0.75e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-216ENST00000486144 1030 ntTSL 218.65■□□□□ 0.585e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC18.59■□□□□ 0.575e-37■□□□□ 10.7
DROSHAQ9NRR4 SERF2-202ENST00000339624 506 ntTSL 2 BASIC17.5■□□□□ 0.395e-37■□□□□ 10.7
DROSHAQ9NRR4 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC15.4■□□□□ 0.064e-8■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-217ENST00000497907 764 ntTSL 329.97■■■□□ 2.391e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-216ENST00000495070 571 ntTSL 425.97■■□□□ 1.751e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-213ENST00000476273 668 ntTSL 321.61■■□□□ 1.051e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.721e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-211ENST00000471589 892 ntTSL 517.65■□□□□ 0.421e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-207ENST00000465079 693 ntTSL 217.48■□□□□ 0.391e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.221e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.83■□□□□ 0.131e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC15.21■□□□□ 0.021e-7■□□□□ 10.7
DROSHAQ9NRR4 ARHGEF2-214ENST00000477754 883 ntTSL 58.61□□□□□ -1.031e-7■□□□□ 10.7
DROSHAQ9NRR4 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 527.83■■■□□ 2.042e-10■□□□□ 10.7
DROSHAQ9NRR4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.52e-10■□□□□ 10.7
DROSHAQ9NRR4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.212e-10■□□□□ 10.7
DROSHAQ9NRR4 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)26.26■■□□□ 1.797e-7■□□□□ 10.7
DROSHAQ9NRR4 ITGA5-202ENST00000435631 1240 ntTSL 222.85■■□□□ 1.257e-7■□□□□ 10.7
DROSHAQ9NRR4 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.147e-7■□□□□ 10.7
DROSHAQ9NRR4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.19■■■□□ 2.269e-8■□□□□ 10.7
DROSHAQ9NRR4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC31.42■■■□□ 2.626e-7■□□□□ 10.7
DROSHAQ9NRR4 TPTEP1-204ENST00000426585 5725 ntTSL 1 (best)15.88■□□□□ 0.136e-7■□□□□ 10.7
DROSHAQ9NRR4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.372e-6■□□□□ 10.7
DROSHAQ9NRR4 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.642e-6■□□□□ 10.7
DROSHAQ9NRR4 GYG2-203ENST00000381161 2852 ntTSL 215.69■□□□□ 0.12e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.68■■□□□ 1.381e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC22.76■■□□□ 1.231e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC13.74□□□□□ -0.211e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-208ENST00000555814 583 ntTSL 413.66□□□□□ -0.221e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.861e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.931e-6■□□□□ 10.7
DROSHAQ9NRR4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.721e-6■□□□□ 10.7
DROSHAQ9NRR4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.495e-11■□□□□ 10.7
DROSHAQ9NRR4 CTSB-223ENST00000532370 693 ntTSL 226.63■■□□□ 1.855e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC24.71■■□□□ 1.555e-11■□□□□ 10.7
DROSHAQ9NRR4 CTSB-209ENST00000525315 586 ntTSL 219.89■□□□□ 0.775e-11■□□□□ 10.7
DROSHAQ9NRR4 CTSB-214ENST00000527243 580 ntTSL 417.3■□□□□ 0.365e-11■□□□□ 10.7
DROSHAQ9NRR4 CTSB-207ENST00000524654 368 ntTSL 516.89■□□□□ 0.295e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC16.43■□□□□ 0.225e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC14.96□□□□□ -0.025e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC12.07□□□□□ -0.485e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC11.68□□□□□ -0.545e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.655e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.755e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-213ENST00000636666 3642 ntTSL 58.67□□□□□ -1.025e-11■□□□□ 10.7
DROSHAQ9NRR4 EPB41-211ENST00000488277 262 ntTSL 31.65□□□□□ -2.155e-11■□□□□ 10.7
DROSHAQ9NRR4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.46■■■□□ 2.473e-37■□□□□ 10.6
DROSHAQ9NRR4 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.224e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-207ENST00000565410 600 ntTSL 231.84■■■□□ 2.696e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-205ENST00000563399 554 ntTSL 429.27■■■□□ 2.286e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-206ENST00000564946 2117 ntTSL 227.37■■□□□ 1.976e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-211ENST00000568754 856 ntTSL 327.3■■□□□ 1.966e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.836e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-201ENST00000287463 2124 ntTSL 225.9■■□□□ 1.746e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-212ENST00000569864 528 ntTSL 324.5■■□□□ 1.516e-8■□□□□ 10.6
DROSHAQ9NRR4 PRR14-204ENST00000563211 786 ntTSL 522.89■■□□□ 1.256e-8■□□□□ 10.6
DROSHAQ9NRR4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.162e-6■□□□□ 10.6
DROSHAQ9NRR4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.352e-6■□□□□ 10.6
DROSHAQ9NRR4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC27.63■■■□□ 2.014e-13■□□□□ 10.6
DROSHAQ9NRR4 MZF1-205ENST00000596039 657 ntTSL 226.24■■□□□ 1.794e-13■□□□□ 10.6
Retrieved 100 of 16,331 protein–RNA pairs in 69.7 ms