RNA–Protein interactions for RNA: ENST00000502771.1

CCND3-206, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-206ENST00000502771 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
CCND3-206ENST00000502771 ABCC9O60706 1549 aa34.23■■■■□ 3.07
CCND3-206ENST00000502771 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
CCND3-206ENST00000502771 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
CCND3-206ENST00000502771 NACADO15069 1562 aa32.19■■■□□ 2.74
CCND3-206ENST00000502771 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
CCND3-206ENST00000502771 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.71
CCND3-206ENST00000502771 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
CCND3-206ENST00000502771 PABPN1Q86U42 306 aaKnown RBP eCLIP31.75■■■□□ 2.67
CCND3-206ENST00000502771 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
CCND3-206ENST00000502771 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
CCND3-206ENST00000502771 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
CCND3-206ENST00000502771 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
CCND3-206ENST00000502771 SCRIBQ14160 1630 aa31.14■■■□□ 2.58
CCND3-206ENST00000502771 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
CCND3-206ENST00000502771 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
CCND3-206ENST00000502771 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
CCND3-206ENST00000502771 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
CCND3-206ENST00000502771 NCAPD3P42695 1498 aa29.64■■■□□ 2.34
CCND3-206ENST00000502771 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
CCND3-206ENST00000502771 ATAD2BQ9ULI0 1458 aa29.59■■■□□ 2.33
CCND3-206ENST00000502771 ERCC6Q03468 1493 aa29.56■■■□□ 2.32
CCND3-206ENST00000502771 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
CCND3-206ENST00000502771 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
CCND3-206ENST00000502771 HMGXB3Q12766 1538 aa29.53■■■□□ 2.32
CCND3-206ENST00000502771 CUX2O14529 1486 aa29.51■■■□□ 2.31
CCND3-206ENST00000502771 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
CCND3-206ENST00000502771 NESP48681 1621 aa29.37■■■□□ 2.29
CCND3-206ENST00000502771 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
CCND3-206ENST00000502771 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
CCND3-206ENST00000502771 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
CCND3-206ENST00000502771 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
CCND3-206ENST00000502771 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
CCND3-206ENST00000502771 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
CCND3-206ENST00000502771 WIZO95785 1651 aa28.9■■■□□ 2.22
CCND3-206ENST00000502771 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CCND3-206ENST00000502771 CADPSQ9ULU8 1353 aa28.74■■■□□ 2.19
CCND3-206ENST00000502771 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
CCND3-206ENST00000502771 WDR62O43379 1518 aa28.66■■■□□ 2.18
CCND3-206ENST00000502771 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
CCND3-206ENST00000502771 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
CCND3-206ENST00000502771 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
CCND3-206ENST00000502771 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
CCND3-206ENST00000502771 CFTRP13569 1480 aa28.41■■■□□ 2.14
CCND3-206ENST00000502771 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
CCND3-206ENST00000502771 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
CCND3-206ENST00000502771 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
CCND3-206ENST00000502771 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
CCND3-206ENST00000502771 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
CCND3-206ENST00000502771 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
CCND3-206ENST00000502771 TOPBP1Q92547 1522 aa27.96■■■□□ 2.07
CCND3-206ENST00000502771 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
CCND3-206ENST00000502771 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
CCND3-206ENST00000502771 RIMBP3CA6NJZ7 1639 aa27.9■■■□□ 2.06
CCND3-206ENST00000502771 RIMBP3BA6NNM3 1639 aa27.9■■■□□ 2.06
CCND3-206ENST00000502771 RIMBP3Q9UFD9 1639 aa27.9■■■□□ 2.06
CCND3-206ENST00000502771 DNMBPQ6XZF7 1577 aa27.88■■■□□ 2.05
CCND3-206ENST00000502771 CHD1O14646 1710 aa27.8■■■□□ 2.04
CCND3-206ENST00000502771 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
CCND3-206ENST00000502771 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
CCND3-206ENST00000502771 ARHGEF11O15085 1522 aa27.74■■■□□ 2.03
CCND3-206ENST00000502771 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.022e-6■■■■■ 29.8
CCND3-206ENST00000502771 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
CCND3-206ENST00000502771 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
CCND3-206ENST00000502771 FBLN2P98095 1184 aa27.49■■□□□ 1.99
CCND3-206ENST00000502771 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
CCND3-206ENST00000502771 ARAP1Q96P48 1450 aa27.46■■□□□ 1.99
CCND3-206ENST00000502771 SOGA1O94964 1423 aa27.45■■□□□ 1.98
CCND3-206ENST00000502771 CUX1P39880 1505 aa27.45■■□□□ 1.98
CCND3-206ENST00000502771 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
CCND3-206ENST00000502771 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
CCND3-206ENST00000502771 WDR97A6NE52 1622 aa27.43■■□□□ 1.98
CCND3-206ENST00000502771 CYB5RLQ6IPT4 315 aa27.42■■□□□ 1.98
CCND3-206ENST00000502771 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
CCND3-206ENST00000502771 CLASP1Q7Z460 1538 aa27.34■■□□□ 1.97
CCND3-206ENST00000502771 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
CCND3-206ENST00000502771 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
CCND3-206ENST00000502771 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
CCND3-206ENST00000502771 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
CCND3-206ENST00000502771 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
CCND3-206ENST00000502771 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
CCND3-206ENST00000502771 TRHP20396 242 aaPredicted RBP27.2■■□□□ 1.94
CCND3-206ENST00000502771 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
CCND3-206ENST00000502771 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
CCND3-206ENST00000502771 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
CCND3-206ENST00000502771 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
CCND3-206ENST00000502771 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
CCND3-206ENST00000502771 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CCND3-206ENST00000502771 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
CCND3-206ENST00000502771 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
CCND3-206ENST00000502771 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
CCND3-206ENST00000502771 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
CCND3-206ENST00000502771 NUP160Q12769 1436 aa26.83■■□□□ 1.89
CCND3-206ENST00000502771 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
CCND3-206ENST00000502771 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
CCND3-206ENST00000502771 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
CCND3-206ENST00000502771 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
CCND3-206ENST00000502771 KIF13AQ9H1H9 1805 aa26.64■■□□□ 1.85
CCND3-206ENST00000502771 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
CCND3-206ENST00000502771 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms