RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
CCND3-220ENST00000514382 ABCC9O60706 1549 aa31.04■■■□□ 2.56
CCND3-220ENST00000514382 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
CCND3-220ENST00000514382 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
CCND3-220ENST00000514382 DNAJC5BQ9UF47 199 aa29.36■■■□□ 2.29
CCND3-220ENST00000514382 NACADO15069 1562 aa29.13■■■□□ 2.25
CCND3-220ENST00000514382 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
CCND3-220ENST00000514382 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
CCND3-220ENST00000514382 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
CCND3-220ENST00000514382 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
CCND3-220ENST00000514382 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
CCND3-220ENST00000514382 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
CCND3-220ENST00000514382 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
CCND3-220ENST00000514382 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
CCND3-220ENST00000514382 CC2D2AQ9P2K1 1620 aa28.04■■■□□ 2.08
CCND3-220ENST00000514382 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
CCND3-220ENST00000514382 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
CCND3-220ENST00000514382 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
CCND3-220ENST00000514382 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
CCND3-220ENST00000514382 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
CCND3-220ENST00000514382 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
CCND3-220ENST00000514382 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
CCND3-220ENST00000514382 NESP48681 1621 aa26.72■■□□□ 1.87
CCND3-220ENST00000514382 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
CCND3-220ENST00000514382 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
CCND3-220ENST00000514382 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
CCND3-220ENST00000514382 CUX2O14529 1486 aa26.65■■□□□ 1.86
CCND3-220ENST00000514382 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
CCND3-220ENST00000514382 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
CCND3-220ENST00000514382 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
CCND3-220ENST00000514382 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
CCND3-220ENST00000514382 THOC2Q8NI27 1593 aaKnown RBP26.43■■□□□ 1.82
CCND3-220ENST00000514382 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
CCND3-220ENST00000514382 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
CCND3-220ENST00000514382 WIZO95785 1651 aa26.27■■□□□ 1.8
CCND3-220ENST00000514382 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
CCND3-220ENST00000514382 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
CCND3-220ENST00000514382 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
CCND3-220ENST00000514382 WDR62O43379 1518 aa25.95■■□□□ 1.74
CCND3-220ENST00000514382 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
CCND3-220ENST00000514382 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
CCND3-220ENST00000514382 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
CCND3-220ENST00000514382 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CCND3-220ENST00000514382 CFTRP13569 1480 aa25.79■■□□□ 1.72
CCND3-220ENST00000514382 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
CCND3-220ENST00000514382 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
CCND3-220ENST00000514382 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
CCND3-220ENST00000514382 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
CCND3-220ENST00000514382 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
CCND3-220ENST00000514382 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
CCND3-220ENST00000514382 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
CCND3-220ENST00000514382 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3CA6NJZ7 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3BA6NNM3 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3Q9UFD9 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
CCND3-220ENST00000514382 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
CCND3-220ENST00000514382 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
CCND3-220ENST00000514382 CHD1O14646 1710 aa25.16■■□□□ 1.62
CCND3-220ENST00000514382 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.616e-7■■■■■ 37.8
CCND3-220ENST00000514382 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
CCND3-220ENST00000514382 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
CCND3-220ENST00000514382 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
CCND3-220ENST00000514382 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
CCND3-220ENST00000514382 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
CCND3-220ENST00000514382 CUX1P39880 1505 aa24.94■■□□□ 1.58
CCND3-220ENST00000514382 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
CCND3-220ENST00000514382 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
CCND3-220ENST00000514382 SOGA1O94964 1423 aa24.9■■□□□ 1.58
CCND3-220ENST00000514382 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
CCND3-220ENST00000514382 FBLN2P98095 1184 aa24.87■■□□□ 1.57
CCND3-220ENST00000514382 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
CCND3-220ENST00000514382 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
CCND3-220ENST00000514382 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
CCND3-220ENST00000514382 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
CCND3-220ENST00000514382 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
CCND3-220ENST00000514382 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
CCND3-220ENST00000514382 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
CCND3-220ENST00000514382 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
CCND3-220ENST00000514382 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
CCND3-220ENST00000514382 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
CCND3-220ENST00000514382 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
CCND3-220ENST00000514382 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
CCND3-220ENST00000514382 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
CCND3-220ENST00000514382 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
CCND3-220ENST00000514382 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
CCND3-220ENST00000514382 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
CCND3-220ENST00000514382 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
CCND3-220ENST00000514382 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
CCND3-220ENST00000514382 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
CCND3-220ENST00000514382 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
CCND3-220ENST00000514382 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.499e-6■■■■■ 50.1
CCND3-220ENST00000514382 NUP160Q12769 1436 aa24.35■■□□□ 1.49
CCND3-220ENST00000514382 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
CCND3-220ENST00000514382 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
CCND3-220ENST00000514382 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
CCND3-220ENST00000514382 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
CCND3-220ENST00000514382 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
CCND3-220ENST00000514382 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CCND3-220ENST00000514382 JPH4Q96JJ6 628 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms