RNA–Protein interactions for RNA: ENST00000511686.5

CCND3-216, Transcript of cyclin D3, humanhuman

TSL 3

Gene CCND3, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-216ENST00000511686 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
CCND3-216ENST00000511686 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
CCND3-216ENST00000511686 ABCC9O60706 1549 aa32.81■■■□□ 2.84
CCND3-216ENST00000511686 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
CCND3-216ENST00000511686 NACADO15069 1562 aa31.44■■■□□ 2.62
CCND3-216ENST00000511686 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
CCND3-216ENST00000511686 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
CCND3-216ENST00000511686 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
CCND3-216ENST00000511686 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
CCND3-216ENST00000511686 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
CCND3-216ENST00000511686 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
CCND3-216ENST00000511686 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
CCND3-216ENST00000511686 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
CCND3-216ENST00000511686 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
CCND3-216ENST00000511686 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
CCND3-216ENST00000511686 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
CCND3-216ENST00000511686 CC2D2AQ9P2K1 1620 aa29.71■■■□□ 2.35
CCND3-216ENST00000511686 CECR2Q9BXF3 1484 aa29.49■■■□□ 2.31
CCND3-216ENST00000511686 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
CCND3-216ENST00000511686 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
CCND3-216ENST00000511686 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
CCND3-216ENST00000511686 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
CCND3-216ENST00000511686 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
CCND3-216ENST00000511686 MROH2BQ7Z745 1585 aa28.87■■■□□ 2.21
CCND3-216ENST00000511686 HMGXB3Q12766 1538 aa28.86■■■□□ 2.21
CCND3-216ENST00000511686 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
CCND3-216ENST00000511686 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
CCND3-216ENST00000511686 WIZO95785 1651 aa28.59■■■□□ 2.17
CCND3-216ENST00000511686 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
CCND3-216ENST00000511686 NESP48681 1621 aa28.36■■■□□ 2.13
CCND3-216ENST00000511686 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
CCND3-216ENST00000511686 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
CCND3-216ENST00000511686 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
CCND3-216ENST00000511686 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
CCND3-216ENST00000511686 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
CCND3-216ENST00000511686 CUX2O14529 1486 aa28.08■■■□□ 2.09
CCND3-216ENST00000511686 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
CCND3-216ENST00000511686 THOC2Q8NI27 1593 aaKnown RBP28.01■■■□□ 2.07
CCND3-216ENST00000511686 CFTRP13569 1480 aa27.93■■■□□ 2.06
CCND3-216ENST00000511686 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
CCND3-216ENST00000511686 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
CCND3-216ENST00000511686 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
CCND3-216ENST00000511686 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
CCND3-216ENST00000511686 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
CCND3-216ENST00000511686 WDR62O43379 1518 aa27.72■■■□□ 2.03
CCND3-216ENST00000511686 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
CCND3-216ENST00000511686 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
CCND3-216ENST00000511686 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
CCND3-216ENST00000511686 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
CCND3-216ENST00000511686 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
CCND3-216ENST00000511686 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
CCND3-216ENST00000511686 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
CCND3-216ENST00000511686 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
CCND3-216ENST00000511686 TARBP1Q13395 1621 aaKnown RBP27.11■■□□□ 1.93
CCND3-216ENST00000511686 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
CCND3-216ENST00000511686 CUX1P39880 1505 aa27.09■■□□□ 1.93
CCND3-216ENST00000511686 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
CCND3-216ENST00000511686 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
CCND3-216ENST00000511686 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
CCND3-216ENST00000511686 SOGA1O94964 1423 aa26.98■■□□□ 1.91
CCND3-216ENST00000511686 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.94e-7■■■■■ 38.3
CCND3-216ENST00000511686 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
CCND3-216ENST00000511686 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
CCND3-216ENST00000511686 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
CCND3-216ENST00000511686 OSCARQ8IYS5 282 aa26.84■■□□□ 1.89
CCND3-216ENST00000511686 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
CCND3-216ENST00000511686 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.899e-6■■■■■ 50.1
CCND3-216ENST00000511686 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
CCND3-216ENST00000511686 CHD1O14646 1710 aa26.8■■□□□ 1.88
CCND3-216ENST00000511686 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
CCND3-216ENST00000511686 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
CCND3-216ENST00000511686 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
CCND3-216ENST00000511686 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
CCND3-216ENST00000511686 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
CCND3-216ENST00000511686 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
CCND3-216ENST00000511686 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
CCND3-216ENST00000511686 FBLN2P98095 1184 aa26.61■■□□□ 1.85
CCND3-216ENST00000511686 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
CCND3-216ENST00000511686 CHMP7Q8WUX9 453 aaPredicted RBP26.52■■□□□ 1.84
CCND3-216ENST00000511686 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.83
CCND3-216ENST00000511686 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.83
CCND3-216ENST00000511686 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.83
CCND3-216ENST00000511686 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
CCND3-216ENST00000511686 ADAMTS12P58397 1594 aa26.45■■□□□ 1.82
CCND3-216ENST00000511686 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
CCND3-216ENST00000511686 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
CCND3-216ENST00000511686 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
CCND3-216ENST00000511686 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
CCND3-216ENST00000511686 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
CCND3-216ENST00000511686 KIF27Q86VH2 1401 aa26.28■■□□□ 1.8
CCND3-216ENST00000511686 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
CCND3-216ENST00000511686 NUP160Q12769 1436 aa26.24■■□□□ 1.79
CCND3-216ENST00000511686 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
CCND3-216ENST00000511686 CUL7Q14999 1698 aa26.22■■□□□ 1.79
CCND3-216ENST00000511686 IGF1RP08069 1367 aa26.18■■□□□ 1.78
CCND3-216ENST00000511686 CYB5RLQ6IPT4 315 aa26.16■■□□□ 1.78
CCND3-216ENST00000511686 SHROOM2Q13796 1616 aa26.12■■□□□ 1.77
CCND3-216ENST00000511686 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
CCND3-216ENST00000511686 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
CCND3-216ENST00000511686 CARMIL1Q5VZK9 1371 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms