Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF48Q96MX3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 MTDHP4-201ENST00000600287 670 ntBASIC14.34□□□□□ -0.11
ZNF48Q96MX3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 FLJ13224-201ENST00000313737 1514 ntBASIC14.34□□□□□ -0.11
ZNF48Q96MX3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF48Q96MX3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF48Q96MX3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 BX842568.4-201ENST00000421222 227 ntBASIC14.33□□□□□ -0.12
ZNF48Q96MX3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 AC034105.1-201ENST00000563488 319 ntBASIC14.33□□□□□ -0.12
ZNF48Q96MX3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 AC097374.2-201ENST00000618617 1306 ntBASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF48Q96MX3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF48Q96MX3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms