Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.8□□□□□ -0.04
SIX6O95475 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SIX6O95475 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.8□□□□□ -0.04
SIX6O95475 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 AC034236.2-201ENST00000606662 1610 ntBASIC14.8□□□□□ -0.04
SIX6O95475 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIX6O95475 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.8□□□□□ -0.04
SIX6O95475 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SIX6O95475 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.79□□□□□ -0.04
SIX6O95475 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
SIX6O95475 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 MIR149-201ENST00000384879 89 ntBASIC14.79□□□□□ -0.04
SIX6O95475 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 AC006015.1-201ENST00000429970 570 ntBASIC14.79□□□□□ -0.04
SIX6O95475 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.79□□□□□ -0.04
SIX6O95475 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.79□□□□□ -0.04
SIX6O95475 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.79□□□□□ -0.04
SIX6O95475 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.79□□□□□ -0.04
SIX6O95475 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.79□□□□□ -0.04
SIX6O95475 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.79□□□□□ -0.04
SIX6O95475 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.79□□□□□ -0.04
SIX6O95475 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.79□□□□□ -0.04
SIX6O95475 AC116353.5-201ENST00000638148 1699 ntBASIC14.79□□□□□ -0.04
SIX6O95475 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.79□□□□□ -0.04
SIX6O95475 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SIX6O95475 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIX6O95475 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.78□□□□□ -0.04
SIX6O95475 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
SIX6O95475 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SIX6O95475 REXO1L11P-201ENST00000620964 1927 ntBASIC14.78□□□□□ -0.04
SIX6O95475 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
SIX6O95475 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIX6O95475 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SIX6O95475 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.78□□□□□ -0.04
SIX6O95475 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms