Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1DP48730 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1DP48730 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1DP48730 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1DP48730 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1DP48730 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1DP48730 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1DP48730 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1DP48730 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1DP48730 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CSNK1DP48730 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1DP48730 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1DP48730 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1DP48730 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.71■□□□□ 0.43
CSNK1DP48730 STK19B-204ENST00000512515 211 ntBASIC17.71■□□□□ 0.43
CSNK1DP48730 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 NKAPP1-205ENST00000585790 367 ntBASIC17.71■□□□□ 0.43
CSNK1DP48730 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.71■□□□□ 0.43
CSNK1DP48730 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.71■□□□□ 0.43
CSNK1DP48730 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK1DP48730 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1DP48730 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.71■□□□□ 0.42
CSNK1DP48730 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1DP48730 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1DP48730 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1DP48730 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1DP48730 AC009336.1-201ENST00000608941 1553 ntBASIC17.7■□□□□ 0.42
CSNK1DP48730 AL355312.1-201ENST00000407115 2176 ntBASIC17.7■□□□□ 0.42
CSNK1DP48730 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1DP48730 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 AC134043.2-201ENST00000624206 2238 ntBASIC17.7■□□□□ 0.42
CSNK1DP48730 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CSNK1DP48730 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1DP48730 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.7■□□□□ 0.42
CSNK1DP48730 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1DP48730 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.7■□□□□ 0.42
CSNK1DP48730 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CSNK1DP48730 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1DP48730 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1DP48730 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1DP48730 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSNK1DP48730 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms