Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.572e-7■■□□□ 13.4
CSTF2TQ9H0L4 MTA1-210ENST00000481012 987 ntTSL 515.83■□□□□ 0.124e-7■■□□□ 13.4
CSTF2TQ9H0L4 MTA1-204ENST00000424723 904 ntTSL 1 (best)14.47□□□□□ -0.094e-7■■□□□ 13.4
CSTF2TQ9H0L4 BCR-204ENST00000427791 771 ntTSL 1 (best)11.88□□□□□ -0.516e-8■■□□□ 13.4
CSTF2TQ9H0L4 SYNJ2-205ENST00000449320 680 ntTSL 47.27□□□□□ -1.251e-6■■□□□ 13.4
CSTF2TQ9H0L4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.17■□□□□ 0.981e-8■■□□□ 13.4
CSTF2TQ9H0L4 BCAR1-222ENST00000569340 714 ntTSL 312.47□□□□□ -0.411e-8■■□□□ 13.4
CSTF2TQ9H0L4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.61■□□□□ 0.572e-12■■□□□ 13.4
CSTF2TQ9H0L4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.13■□□□□ 0.012e-12■■□□□ 13.4
CSTF2TQ9H0L4 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC8.72□□□□□ -1.012e-12■■□□□ 13.4
CSTF2TQ9H0L4 TGIF1-214ENST00000549546 820 ntTSL 54.61□□□□□ -1.672e-12■■□□□ 13.4
CSTF2TQ9H0L4 PYGB-202ENST00000428458 734 ntTSL 310.85□□□□□ -0.672e-6■■□□□ 13.4
CSTF2TQ9H0L4 PER1-208ENST00000579065 1262 ntTSL 515.54■□□□□ 0.081e-7■■□□□ 13.4
CSTF2TQ9H0L4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.051e-7■■□□□ 13.4
CSTF2TQ9H0L4 PER1-213ENST00000581703 528 ntTSL 411.02□□□□□ -0.651e-7■■□□□ 13.4
CSTF2TQ9H0L4 PER1-214ENST00000582719 3677 ntTSL 510.97□□□□□ -0.651e-7■■□□□ 13.4
CSTF2TQ9H0L4 XPO1-211ENST00000451765 643 ntTSL 315.29■□□□□ 0.044e-12■■□□□ 13.4
CSTF2TQ9H0L4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.1■□□□□ 0.332e-6■■□□□ 13.4
CSTF2TQ9H0L4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.15■□□□□ 0.822e-7■■□□□ 13.4
CSTF2TQ9H0L4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.63□□□□□ -0.232e-7■■□□□ 13.4
CSTF2TQ9H0L4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.232e-7■■□□□ 13.4
CSTF2TQ9H0L4 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.32□□□□□ -0.922e-7■■□□□ 13.4
CSTF2TQ9H0L4 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.072e-7■■□□□ 13.4
CSTF2TQ9H0L4 USP36-205ENST00000586531 898 ntTSL 326.07■■□□□ 1.765e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-224ENST00000592907 543 ntTSL 222.32■■□□□ 1.165e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-209ENST00000587783 679 ntTSL 320.9■□□□□ 0.945e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-220ENST00000591942 564 ntTSL 520.32■□□□□ 0.845e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.785e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-212ENST00000588365 546 ntTSL 419.69■□□□□ 0.745e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.71■□□□□ 0.595e-8■■□□□ 13.4
CSTF2TQ9H0L4 USP36-222ENST00000592275 594 ntTSL 413.38□□□□□ -0.275e-8■■□□□ 13.4
CSTF2TQ9H0L4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.24e-7■■□□□ 13.4
CSTF2TQ9H0L4 FCGRT-214ENST00000598927 1616 ntTSL 516.47■□□□□ 0.233e-6■■□□□ 13.4
CSTF2TQ9H0L4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.193e-6■■□□□ 13.4
CSTF2TQ9H0L4 FCGRT-209ENST00000596147 383 ntTSL 316.14■□□□□ 0.173e-6■■□□□ 13.4
CSTF2TQ9H0L4 FCGRT-216ENST00000599701 579 ntTSL 214.74□□□□□ -0.053e-6■■□□□ 13.4
CSTF2TQ9H0L4 FCGRT-213ENST00000598491 578 ntTSL 513.72□□□□□ -0.213e-6■■□□□ 13.4
CSTF2TQ9H0L4 ARF1-211ENST00000490705 881 ntTSL 312.53□□□□□ -0.42e-6■■□□□ 13.4
CSTF2TQ9H0L4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.17■□□□□ 0.342e-6■■□□□ 13.4
CSTF2TQ9H0L4 CDC14B-209ENST00000474602 4960 ntTSL 1 (best)20.92■□□□□ 0.945e-7■■□□□ 13.4
CSTF2TQ9H0L4 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.432e-7■■□□□ 13.4
CSTF2TQ9H0L4 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-7■■□□□ 13.4
CSTF2TQ9H0L4 KIAA0368-206ENST00000602978 539 ntAPPRIS ALT2 TSL 418.97■□□□□ 0.637e-7■■□□□ 13.4
CSTF2TQ9H0L4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.245e-6■■□□□ 13.4
CSTF2TQ9H0L4 KIAA0368-205ENST00000602447 2806 ntAPPRIS ALT2 TSL 515.69■□□□□ 0.17e-7■■□□□ 13.4
CSTF2TQ9H0L4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.077e-7■■□□□ 13.4
CSTF2TQ9H0L4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.8□□□□□ -0.25e-6■■□□□ 13.4
CSTF2TQ9H0L4 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.577e-7■■□□□ 13.4
CSTF2TQ9H0L4 C20orf204-201ENST00000358393 1466 ntTSL 222.04■■□□□ 1.123e-9■■□□□ 13.4
CSTF2TQ9H0L4 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)20.81■□□□□ 0.923e-9■■□□□ 13.4
CSTF2TQ9H0L4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.52e-11■■□□□ 13.4
CSTF2TQ9H0L4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.8□□□□□ -0.24e-13■■□□□ 13.4
CSTF2TQ9H0L4 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.12□□□□□ -0.794e-13■■□□□ 13.4
CSTF2TQ9H0L4 TRIM8-202ENST00000462202 891 ntTSL 520.3■□□□□ 0.844e-7■■□□□ 13.4
CSTF2TQ9H0L4 CDHR3-209ENST00000472116 993 ntTSL 29.95□□□□□ -0.823e-20■■□□□ 13.4
CSTF2TQ9H0L4 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.046e-8■■□□□ 13.4
CSTF2TQ9H0L4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.13□□□□□ -1.116e-8■■□□□ 13.4
CSTF2TQ9H0L4 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.156e-8■■□□□ 13.4
CSTF2TQ9H0L4 TSPAN32-211ENST00000484104 725 ntTSL 218.99■□□□□ 0.632e-6■■□□□ 13.3
CSTF2TQ9H0L4 TSPAN32-215ENST00000493948 641 ntTSL 317.05■□□□□ 0.322e-6■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-216ENST00000584397 622 ntTSL 223.02■■□□□ 1.286e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-213ENST00000583499 560 ntTSL 222.25■■□□□ 1.156e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.94■□□□□ 0.946e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-211ENST00000582984 823 ntTSL 320.64■□□□□ 0.896e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.55■□□□□ 0.566e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.56e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-212ENST00000583111 574 ntTSL 217.76■□□□□ 0.436e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.99■□□□□ 0.156e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-206ENST00000580033 547 ntTSL 415.84■□□□□ 0.136e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-215ENST00000583868 815 ntTSL 312.9□□□□□ -0.346e-7■■□□□ 13.3
CSTF2TQ9H0L4 ARHGDIA-204ENST00000578351 421 ntTSL 411.45□□□□□ -0.586e-7■■□□□ 13.3
CSTF2TQ9H0L4 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.293e-6■■□□□ 13.3
CSTF2TQ9H0L4 AC008537.1-201ENST00000601627 575 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.688e-7■■□□□ 13.3
CSTF2TQ9H0L4 LRRFIP1-207ENST00000465870 1626 ntTSL 314.38□□□□□ -0.113e-6■■□□□ 13.3
CSTF2TQ9H0L4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.72□□□□□ -1.496e-9■■□□□ 13.3
CSTF2TQ9H0L4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.846e-9■■□□□ 13.3
CSTF2TQ9H0L4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.065e-10■■□□□ 13.3
CSTF2TQ9H0L4 CRIM1-203ENST00000426856 667 ntTSL 314.43□□□□□ -0.15e-10■■□□□ 13.3
CSTF2TQ9H0L4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.962e-6■■□□□ 13.3
CSTF2TQ9H0L4 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.658e-20■■□□□ 13.3
CSTF2TQ9H0L4 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC10.73□□□□□ -0.698e-20■■□□□ 13.3
CSTF2TQ9H0L4 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC10.61□□□□□ -0.718e-20■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 417.13■□□□□ 0.333e-6■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-208ENST00000453122 634 ntTSL 415.84■□□□□ 0.133e-6■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.343e-6■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.483e-6■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.493e-6■■□□□ 13.3
CSTF2TQ9H0L4 HJURP-209ENST00000454020 806 ntTSL 511.3□□□□□ -0.63e-6■■□□□ 13.3
CSTF2TQ9H0L4 NUBP2-209ENST00000566090 708 ntTSL 219.84■□□□□ 0.772e-7■■□□□ 13.3
CSTF2TQ9H0L4 NUBP2-210ENST00000566447 511 ntTSL 417.6■□□□□ 0.412e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-208ENST00000519418 569 ntTSL 317.54■□□□□ 0.42e-7■■□□□ 13.3
CSTF2TQ9H0L4 ANXA11-208ENST00000463657 780 ntTSL 517.11■□□□□ 0.332e-7■■□□□ 13.3
CSTF2TQ9H0L4 NUBP2-204ENST00000563821 2235 nt17.06■□□□□ 0.322e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-209ENST00000520368 653 ntTSL 415.6■□□□□ 0.092e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-203ENST00000518099 1159 ntTSL 1 (best)15.26■□□□□ 0.032e-7■■□□□ 13.3
CSTF2TQ9H0L4 DOT1L-204ENST00000457590 2907 ntTSL 514.96□□□□□ -0.012e-7■■□□□ 13.3
CSTF2TQ9H0L4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.052e-7■■□□□ 13.3
CSTF2TQ9H0L4 NUBP2-213ENST00000568610 1480 ntTSL 513.88□□□□□ -0.192e-7■■□□□ 13.3
CSTF2TQ9H0L4 ACSF3-207ENST00000537155 848 ntTSL 212.13□□□□□ -0.472e-7■■□□□ 13.3
CSTF2TQ9H0L4 ACSF3-203ENST00000393145 7020 nt11.62□□□□□ -0.552e-7■■□□□ 13.3
Retrieved 100 of 19,151 protein–RNA pairs in 281.8 ms