RNA–Protein interactions for RNA: ENST00000393145.5

ACSF3-203, Transcript of acyl-CoA synthetase family member 3, humanhuman

Gene ACSF3, Length 7,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-203ENST00000393145 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
ACSF3-203ENST00000393145 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
ACSF3-203ENST00000393145 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
ACSF3-203ENST00000393145 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
ACSF3-203ENST00000393145 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
ACSF3-203ENST00000393145 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
ACSF3-203ENST00000393145 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
ACSF3-203ENST00000393145 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
ACSF3-203ENST00000393145 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
ACSF3-203ENST00000393145 MYT1Q01538 1121 aa18.39■□□□□ 0.53
ACSF3-203ENST00000393145 ATP1B4Q9UN42 357 aaPredicted RBP18.34■□□□□ 0.53
ACSF3-203ENST00000393145 APLP2Q06481 763 aa18.24■□□□□ 0.51
ACSF3-203ENST00000393145 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
ACSF3-203ENST00000393145 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
ACSF3-203ENST00000393145 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
ACSF3-203ENST00000393145 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
ACSF3-203ENST00000393145 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
ACSF3-203ENST00000393145 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
ACSF3-203ENST00000393145 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
ACSF3-203ENST00000393145 NEFLP07196 543 aa17.71■□□□□ 0.43
ACSF3-203ENST00000393145 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
ACSF3-203ENST00000393145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
ACSF3-203ENST00000393145 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
ACSF3-203ENST00000393145 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
ACSF3-203ENST00000393145 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
ACSF3-203ENST00000393145 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
ACSF3-203ENST00000393145 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
ACSF3-203ENST00000393145 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
ACSF3-203ENST00000393145 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
ACSF3-203ENST00000393145 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
ACSF3-203ENST00000393145 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
ACSF3-203ENST00000393145 ITGAEP38570 1179 aa17.23■□□□□ 0.35
ACSF3-203ENST00000393145 FBLN2P98095 1184 aa17.15■□□□□ 0.34
ACSF3-203ENST00000393145 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
ACSF3-203ENST00000393145 BCANQ96GW7 911 aa17.09■□□□□ 0.33
ACSF3-203ENST00000393145 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
ACSF3-203ENST00000393145 HRCP23327 699 aa17.06■□□□□ 0.32
ACSF3-203ENST00000393145 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
ACSF3-203ENST00000393145 CLSPNQ9HAW4 1339 aa17.03■□□□□ 0.32
ACSF3-203ENST00000393145 BCL11AQ9H165 835 aa17■□□□□ 0.31
ACSF3-203ENST00000393145 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
ACSF3-203ENST00000393145 ABCC9O60706 1549 aa16.88■□□□□ 0.29
ACSF3-203ENST00000393145 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
ACSF3-203ENST00000393145 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
ACSF3-203ENST00000393145 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
ACSF3-203ENST00000393145 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
ACSF3-203ENST00000393145 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
ACSF3-203ENST00000393145 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
ACSF3-203ENST00000393145 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
ACSF3-203ENST00000393145 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
ACSF3-203ENST00000393145 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
ACSF3-203ENST00000393145 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
ACSF3-203ENST00000393145 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
ACSF3-203ENST00000393145 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
ACSF3-203ENST00000393145 A0A0G2JS52 829 aa16.59■□□□□ 0.25
ACSF3-203ENST00000393145 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
ACSF3-203ENST00000393145 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
ACSF3-203ENST00000393145 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
ACSF3-203ENST00000393145 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
ACSF3-203ENST00000393145 ARXQ96QS3 562 aa16.48■□□□□ 0.23
ACSF3-203ENST00000393145 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
ACSF3-203ENST00000393145 ZNF777Q9ULD5 760 aaPredicted RBP16.41■□□□□ 0.22
ACSF3-203ENST00000393145 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
ACSF3-203ENST00000393145 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
ACSF3-203ENST00000393145 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
ACSF3-203ENST00000393145 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
ACSF3-203ENST00000393145 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
ACSF3-203ENST00000393145 NBR1Q14596 966 aa16.37■□□□□ 0.21
ACSF3-203ENST00000393145 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
ACSF3-203ENST00000393145 ANP32CO43423 234 aa16.29■□□□□ 0.2
ACSF3-203ENST00000393145 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
ACSF3-203ENST00000393145 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.19
ACSF3-203ENST00000393145 FKBP8Q14318 412 aa16.19■□□□□ 0.18
ACSF3-203ENST00000393145 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
ACSF3-203ENST00000393145 NEFMP07197 916 aa16.18■□□□□ 0.18
ACSF3-203ENST00000393145 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
ACSF3-203ENST00000393145 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
ACSF3-203ENST00000393145 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
ACSF3-203ENST00000393145 HSP90AA1P07900 732 aaKnown RBP16.14■□□□□ 0.17
ACSF3-203ENST00000393145 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
ACSF3-203ENST00000393145 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
ACSF3-203ENST00000393145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.17
ACSF3-203ENST00000393145 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
ACSF3-203ENST00000393145 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
ACSF3-203ENST00000393145 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
ACSF3-203ENST00000393145 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
ACSF3-203ENST00000393145 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
ACSF3-203ENST00000393145 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
ACSF3-203ENST00000393145 SENP3-EIF4A1A0A087X0R7 540 aa15.95■□□□□ 0.14
ACSF3-203ENST00000393145 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
ACSF3-203ENST00000393145 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
ACSF3-203ENST00000393145 HNRNPUQ00839 825 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACSF3-203ENST00000393145 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
ACSF3-203ENST00000393145 PPP1R15AO75807 674 aaPredicted RBP15.88■□□□□ 0.13
ACSF3-203ENST00000393145 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
ACSF3-203ENST00000393145 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
ACSF3-203ENST00000393145 UPF2Q9HAU5 1272 aaKnown RBP15.84■□□□□ 0.13
ACSF3-203ENST00000393145 NPHP1O15259 732 aa15.84■□□□□ 0.13
ACSF3-203ENST00000393145 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
ACSF3-203ENST00000393145 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms