RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
CSNK2A1-201ENST00000217244 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CSNK2A1-201ENST00000217244 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
CSNK2A1-201ENST00000217244 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
CSNK2A1-201ENST00000217244 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
CSNK2A1-201ENST00000217244 FAM9AQ8IZU1 332 aaPredicted RBP14.26□□□□□ -0.13
CSNK2A1-201ENST00000217244 ABCC9O60706 1549 aa14.06□□□□□ -0.16
CSNK2A1-201ENST00000217244 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
CSNK2A1-201ENST00000217244 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
CSNK2A1-201ENST00000217244 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
CSNK2A1-201ENST00000217244 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
CSNK2A1-201ENST00000217244 LOC105371045A0A1W2PR82 267 aa13.94□□□□□ -0.18
CSNK2A1-201ENST00000217244 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
CSNK2A1-201ENST00000217244 ZCCHC6Q5VYS8 1495 aaKnown RBP13.84□□□□□ -0.19
CSNK2A1-201ENST00000217244 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSNK2A1-201ENST00000217244 PPARGC1BQ86YN6 1023 aaKnown RBP13.82□□□□□ -0.2
CSNK2A1-201ENST00000217244 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
CSNK2A1-201ENST00000217244 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
CSNK2A1-201ENST00000217244 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
CSNK2A1-201ENST00000217244 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
CSNK2A1-201ENST00000217244 APLP2Q06481 763 aa13.39□□□□□ -0.27
CSNK2A1-201ENST00000217244 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.27
CSNK2A1-201ENST00000217244 TRIM26Q12899 539 aaPredicted RBP13.33□□□□□ -0.28
CSNK2A1-201ENST00000217244 HRCP23327 699 aa13.31□□□□□ -0.28
CSNK2A1-201ENST00000217244 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
CSNK2A1-201ENST00000217244 RSF1Q96T23 1441 aaPredicted RBP13.29□□□□□ -0.28
CSNK2A1-201ENST00000217244 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
CSNK2A1-201ENST00000217244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
CSNK2A1-201ENST00000217244 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
CSNK2A1-201ENST00000217244 ITGAEP38570 1179 aa13.16□□□□□ -0.3
CSNK2A1-201ENST00000217244 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
CSNK2A1-201ENST00000217244 RB1CC1Q8TDY2 1594 aa13.05□□□□□ -0.32
CSNK2A1-201ENST00000217244 NACADO15069 1562 aa13.04□□□□□ -0.32
CSNK2A1-201ENST00000217244 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
CSNK2A1-201ENST00000217244 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
CSNK2A1-201ENST00000217244 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
CSNK2A1-201ENST00000217244 P3H3Q8IVL6 736 aa12.96□□□□□ -0.34
CSNK2A1-201ENST00000217244 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
CSNK2A1-201ENST00000217244 WIZO95785 1651 aa12.89□□□□□ -0.35
CSNK2A1-201ENST00000217244 ARID3CA6NKF2 412 aa12.86□□□□□ -0.35
CSNK2A1-201ENST00000217244 ABCC8Q09428 1581 aa12.83□□□□□ -0.35
CSNK2A1-201ENST00000217244 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
CSNK2A1-201ENST00000217244 SOGA1O94964 1423 aa12.81□□□□□ -0.36
CSNK2A1-201ENST00000217244 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
CSNK2A1-201ENST00000217244 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
CSNK2A1-201ENST00000217244 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
CSNK2A1-201ENST00000217244 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
CSNK2A1-201ENST00000217244 FBLN2P98095 1184 aa12.74□□□□□ -0.37
CSNK2A1-201ENST00000217244 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
CSNK2A1-201ENST00000217244 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
CSNK2A1-201ENST00000217244 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
CSNK2A1-201ENST00000217244 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
CSNK2A1-201ENST00000217244 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
CSNK2A1-201ENST00000217244 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
CSNK2A1-201ENST00000217244 CLIP1P30622 1438 aa12.63□□□□□ -0.39
CSNK2A1-201ENST00000217244 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
CSNK2A1-201ENST00000217244 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
CSNK2A1-201ENST00000217244 TOP2AP11388 1531 aaKnown RBP12.56□□□□□ -0.4
CSNK2A1-201ENST00000217244 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
CSNK2A1-201ENST00000217244 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
CSNK2A1-201ENST00000217244 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
CSNK2A1-201ENST00000217244 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
CSNK2A1-201ENST00000217244 TRIM52Q96A61 297 aa12.52□□□□□ -0.41
CSNK2A1-201ENST00000217244 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
CSNK2A1-201ENST00000217244 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
CSNK2A1-201ENST00000217244 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
CSNK2A1-201ENST00000217244 KANK4Q5T7N3 995 aaPredicted RBP12.46□□□□□ -0.41
CSNK2A1-201ENST00000217244 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
CSNK2A1-201ENST00000217244 EEA1Q15075 1411 aa12.45□□□□□ -0.42
CSNK2A1-201ENST00000217244 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
CSNK2A1-201ENST00000217244 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
CSNK2A1-201ENST00000217244 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
CSNK2A1-201ENST00000217244 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
CSNK2A1-201ENST00000217244 CUX2O14529 1486 aa12.43□□□□□ -0.42
CSNK2A1-201ENST00000217244 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
CSNK2A1-201ENST00000217244 ZNF326Q5BKZ1 582 aaKnown RBP12.41□□□□□ -0.42
CSNK2A1-201ENST00000217244 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
CSNK2A1-201ENST00000217244 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
CSNK2A1-201ENST00000217244 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
CSNK2A1-201ENST00000217244 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
CSNK2A1-201ENST00000217244 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.43
CSNK2A1-201ENST00000217244 RRP7BPQ9NSQ0 103 aa12.33□□□□□ -0.44
CSNK2A1-201ENST00000217244 MIER1Q8N108 512 aa12.32□□□□□ -0.44
CSNK2A1-201ENST00000217244 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
CSNK2A1-201ENST00000217244 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
CSNK2A1-201ENST00000217244 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
CSNK2A1-201ENST00000217244 SIN3AQ96ST3 1273 aa12.3□□□□□ -0.44
CSNK2A1-201ENST00000217244 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
CSNK2A1-201ENST00000217244 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
CSNK2A1-201ENST00000217244 BCANQ96GW7 911 aa12.28□□□□□ -0.44
CSNK2A1-201ENST00000217244 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.45
CSNK2A1-201ENST00000217244 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
CSNK2A1-201ENST00000217244 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
CSNK2A1-201ENST00000217244 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
CSNK2A1-201ENST00000217244 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
CSNK2A1-201ENST00000217244 NESP48681 1621 aa12.21□□□□□ -0.45
CSNK2A1-201ENST00000217244 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
CSNK2A1-201ENST00000217244 NEFLP07196 543 aa12.2□□□□□ -0.46
CSNK2A1-201ENST00000217244 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
CSNK2A1-201ENST00000217244 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms