RNA–Protein interactions for RNA: ENST00000465870.5

LRRFIP1-207, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-207ENST00000465870 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
LRRFIP1-207ENST00000465870 CCDC180Q9P1Z9 1646 aa33.37■■■□□ 2.93
LRRFIP1-207ENST00000465870 ABCC9O60706 1549 aa32.31■■■□□ 2.76
LRRFIP1-207ENST00000465870 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
LRRFIP1-207ENST00000465870 NACADO15069 1562 aa31.29■■■□□ 2.6
LRRFIP1-207ENST00000465870 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
LRRFIP1-207ENST00000465870 RB1CC1Q8TDY2 1594 aa31.24■■■□□ 2.59
LRRFIP1-207ENST00000465870 DCAF1Q9Y4B6 1507 aa31.18■■■□□ 2.58
LRRFIP1-207ENST00000465870 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
LRRFIP1-207ENST00000465870 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
LRRFIP1-207ENST00000465870 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
LRRFIP1-207ENST00000465870 BICRAQ9NZM4 1560 aa30.33■■■□□ 2.45
LRRFIP1-207ENST00000465870 PABPN1Q86U42 306 aaKnown RBP eCLIP30.2■■■□□ 2.43
LRRFIP1-207ENST00000465870 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
LRRFIP1-207ENST00000465870 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
LRRFIP1-207ENST00000465870 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
LRRFIP1-207ENST00000465870 CC2D2AQ9P2K1 1620 aa29.3■■■□□ 2.28
LRRFIP1-207ENST00000465870 CECR2Q9BXF3 1484 aa29.25■■■□□ 2.27
LRRFIP1-207ENST00000465870 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
LRRFIP1-207ENST00000465870 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
LRRFIP1-207ENST00000465870 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
LRRFIP1-207ENST00000465870 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
LRRFIP1-207ENST00000465870 PEG3Q9GZU2 1588 aa28.9■■■□□ 2.22
LRRFIP1-207ENST00000465870 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
LRRFIP1-207ENST00000465870 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
LRRFIP1-207ENST00000465870 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
LRRFIP1-207ENST00000465870 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
LRRFIP1-207ENST00000465870 WIZO95785 1651 aa28.67■■■□□ 2.18
LRRFIP1-207ENST00000465870 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
LRRFIP1-207ENST00000465870 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
LRRFIP1-207ENST00000465870 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
LRRFIP1-207ENST00000465870 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
LRRFIP1-207ENST00000465870 NESP48681 1621 aa28.05■■■□□ 2.08
LRRFIP1-207ENST00000465870 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
LRRFIP1-207ENST00000465870 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
LRRFIP1-207ENST00000465870 CFTRP13569 1480 aa27.93■■■□□ 2.06
LRRFIP1-207ENST00000465870 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
LRRFIP1-207ENST00000465870 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
LRRFIP1-207ENST00000465870 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
LRRFIP1-207ENST00000465870 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
LRRFIP1-207ENST00000465870 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
LRRFIP1-207ENST00000465870 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.01
LRRFIP1-207ENST00000465870 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
LRRFIP1-207ENST00000465870 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
LRRFIP1-207ENST00000465870 CUX2O14529 1486 aa27.51■■□□□ 1.99
LRRFIP1-207ENST00000465870 WDR62O43379 1518 aa27.48■■□□□ 1.99
LRRFIP1-207ENST00000465870 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
LRRFIP1-207ENST00000465870 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
LRRFIP1-207ENST00000465870 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
LRRFIP1-207ENST00000465870 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
LRRFIP1-207ENST00000465870 CUX1P39880 1505 aa27.17■■□□□ 1.94
LRRFIP1-207ENST00000465870 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
LRRFIP1-207ENST00000465870 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
LRRFIP1-207ENST00000465870 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
LRRFIP1-207ENST00000465870 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
LRRFIP1-207ENST00000465870 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
LRRFIP1-207ENST00000465870 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
LRRFIP1-207ENST00000465870 TARBP1Q13395 1621 aaKnown RBP27■■□□□ 1.91
LRRFIP1-207ENST00000465870 SYNJ1O43426 1573 aa27■■□□□ 1.91
LRRFIP1-207ENST00000465870 SOGA1O94964 1423 aa26.93■■□□□ 1.9
LRRFIP1-207ENST00000465870 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
LRRFIP1-207ENST00000465870 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.9
LRRFIP1-207ENST00000465870 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
LRRFIP1-207ENST00000465870 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
LRRFIP1-207ENST00000465870 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
LRRFIP1-207ENST00000465870 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.873e-7■■■□□ 16
LRRFIP1-207ENST00000465870 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
LRRFIP1-207ENST00000465870 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
LRRFIP1-207ENST00000465870 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
LRRFIP1-207ENST00000465870 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
LRRFIP1-207ENST00000465870 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
LRRFIP1-207ENST00000465870 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
LRRFIP1-207ENST00000465870 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
LRRFIP1-207ENST00000465870 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
LRRFIP1-207ENST00000465870 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
LRRFIP1-207ENST00000465870 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
LRRFIP1-207ENST00000465870 KIF27Q86VH2 1401 aa26.47■■□□□ 1.83
LRRFIP1-207ENST00000465870 CHD1O14646 1710 aa26.43■■□□□ 1.82
LRRFIP1-207ENST00000465870 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
LRRFIP1-207ENST00000465870 ADAMTS12P58397 1594 aa26.39■■□□□ 1.82
LRRFIP1-207ENST00000465870 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
LRRFIP1-207ENST00000465870 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
LRRFIP1-207ENST00000465870 IGF1RP08069 1367 aa26.35■■□□□ 1.81
LRRFIP1-207ENST00000465870 FHAD1B1AJZ9 1412 aa26.34■■□□□ 1.81
LRRFIP1-207ENST00000465870 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
LRRFIP1-207ENST00000465870 FBLN2P98095 1184 aa26.31■■□□□ 1.8
LRRFIP1-207ENST00000465870 RUSC2Q8N2Y8 1516 aa26.31■■□□□ 1.8
LRRFIP1-207ENST00000465870 CUL7Q14999 1698 aa26.29■■□□□ 1.8
LRRFIP1-207ENST00000465870 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
LRRFIP1-207ENST00000465870 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
LRRFIP1-207ENST00000465870 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
LRRFIP1-207ENST00000465870 NUP160Q12769 1436 aa26.16■■□□□ 1.78
LRRFIP1-207ENST00000465870 EEA1Q15075 1411 aa26.14■■□□□ 1.78
LRRFIP1-207ENST00000465870 CEP170Q5SW79 1584 aa26.14■■□□□ 1.77
LRRFIP1-207ENST00000465870 FAM9AQ8IZU1 332 aaPredicted RBP26.06■■□□□ 1.76
LRRFIP1-207ENST00000465870 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
LRRFIP1-207ENST00000465870 RAPGEF2Q9Y4G8 1499 aa26.06■■□□□ 1.76
LRRFIP1-207ENST00000465870 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
LRRFIP1-207ENST00000465870 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
LRRFIP1-207ENST00000465870 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 537.8 ms