RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
CSNK2A1-202ENST00000349736 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
CSNK2A1-202ENST00000349736 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
CSNK2A1-202ENST00000349736 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
CSNK2A1-202ENST00000349736 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
CSNK2A1-202ENST00000349736 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
CSNK2A1-202ENST00000349736 PCGF6Q9BYE7 350 aa15.55■□□□□ 0.08
CSNK2A1-202ENST00000349736 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
CSNK2A1-202ENST00000349736 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
CSNK2A1-202ENST00000349736 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
CSNK2A1-202ENST00000349736 ABCC9O60706 1549 aa15.4■□□□□ 0.06
CSNK2A1-202ENST00000349736 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
CSNK2A1-202ENST00000349736 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
CSNK2A1-202ENST00000349736 RANGAP1P46060 587 aaPredicted RBP15.29■□□□□ 0.04
CSNK2A1-202ENST00000349736 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSNK2A1-202ENST00000349736 ZCCHC6Q5VYS8 1495 aaKnown RBP15.18■□□□□ 0.02
CSNK2A1-202ENST00000349736 SCRIBQ14160 1630 aa14.94□□□□□ -0.02
CSNK2A1-202ENST00000349736 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
CSNK2A1-202ENST00000349736 UBTFP17480 764 aaKnown RBP14.93□□□□□ -0.02
CSNK2A1-202ENST00000349736 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
CSNK2A1-202ENST00000349736 HRCP23327 699 aa14.81□□□□□ -0.04
CSNK2A1-202ENST00000349736 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
CSNK2A1-202ENST00000349736 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
CSNK2A1-202ENST00000349736 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
CSNK2A1-202ENST00000349736 APLP2Q06481 763 aa14.68□□□□□ -0.06
CSNK2A1-202ENST00000349736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
CSNK2A1-202ENST00000349736 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
CSNK2A1-202ENST00000349736 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
CSNK2A1-202ENST00000349736 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.07
CSNK2A1-202ENST00000349736 ITGAEP38570 1179 aa14.55□□□□□ -0.08
CSNK2A1-202ENST00000349736 YTHDC1Q96MU7 727 aaKnown RBP14.4□□□□□ -0.1
CSNK2A1-202ENST00000349736 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CSNK2A1-202ENST00000349736 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
CSNK2A1-202ENST00000349736 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
CSNK2A1-202ENST00000349736 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
CSNK2A1-202ENST00000349736 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
CSNK2A1-202ENST00000349736 DCAF1Q9Y4B6 1507 aa14.31□□□□□ -0.12
CSNK2A1-202ENST00000349736 NACADO15069 1562 aa14.21□□□□□ -0.13
CSNK2A1-202ENST00000349736 ARID3CA6NKF2 412 aa14.21□□□□□ -0.14
CSNK2A1-202ENST00000349736 WIZO95785 1651 aa14.18□□□□□ -0.14
CSNK2A1-202ENST00000349736 SOGA1O94964 1423 aa14.16□□□□□ -0.14
CSNK2A1-202ENST00000349736 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
CSNK2A1-202ENST00000349736 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
CSNK2A1-202ENST00000349736 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
CSNK2A1-202ENST00000349736 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.16
CSNK2A1-202ENST00000349736 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
CSNK2A1-202ENST00000349736 NEUROD1Q13562 356 aa14.02□□□□□ -0.16
CSNK2A1-202ENST00000349736 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.16
CSNK2A1-202ENST00000349736 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
CSNK2A1-202ENST00000349736 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
CSNK2A1-202ENST00000349736 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
CSNK2A1-202ENST00000349736 FBLN2P98095 1184 aa13.98□□□□□ -0.17
CSNK2A1-202ENST00000349736 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
CSNK2A1-202ENST00000349736 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
CSNK2A1-202ENST00000349736 CLIP1P30622 1438 aa13.89□□□□□ -0.19
CSNK2A1-202ENST00000349736 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
CSNK2A1-202ENST00000349736 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
CSNK2A1-202ENST00000349736 KANK4Q5T7N3 995 aaPredicted RBP13.82□□□□□ -0.2
CSNK2A1-202ENST00000349736 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
CSNK2A1-202ENST00000349736 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
CSNK2A1-202ENST00000349736 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
CSNK2A1-202ENST00000349736 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
CSNK2A1-202ENST00000349736 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
CSNK2A1-202ENST00000349736 SMARCA4P51532 1647 aa13.77□□□□□ -0.2
CSNK2A1-202ENST00000349736 GOLGA3Q08378 1498 aa13.77□□□□□ -0.21
CSNK2A1-202ENST00000349736 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
CSNK2A1-202ENST00000349736 ATAD2BQ9ULI0 1458 aa13.75□□□□□ -0.21
CSNK2A1-202ENST00000349736 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
CSNK2A1-202ENST00000349736 MIER1Q8N108 512 aa13.72□□□□□ -0.21
CSNK2A1-202ENST00000349736 ZNF777Q9ULD5 760 aaPredicted RBP13.7□□□□□ -0.22
CSNK2A1-202ENST00000349736 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
CSNK2A1-202ENST00000349736 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
CSNK2A1-202ENST00000349736 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
CSNK2A1-202ENST00000349736 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
CSNK2A1-202ENST00000349736 BCANQ96GW7 911 aa13.66□□□□□ -0.22
CSNK2A1-202ENST00000349736 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
CSNK2A1-202ENST00000349736 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
CSNK2A1-202ENST00000349736 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
CSNK2A1-202ENST00000349736 CUX2O14529 1486 aa13.64□□□□□ -0.23
CSNK2A1-202ENST00000349736 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
CSNK2A1-202ENST00000349736 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
CSNK2A1-202ENST00000349736 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
CSNK2A1-202ENST00000349736 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
CSNK2A1-202ENST00000349736 RRP7BPQ9NSQ0 103 aa13.62□□□□□ -0.23
CSNK2A1-202ENST00000349736 EEA1Q15075 1411 aa13.62□□□□□ -0.23
CSNK2A1-202ENST00000349736 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
CSNK2A1-202ENST00000349736 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
CSNK2A1-202ENST00000349736 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
CSNK2A1-202ENST00000349736 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
CSNK2A1-202ENST00000349736 MTUS2Q5JR59 1369 aa13.51□□□□□ -0.25
CSNK2A1-202ENST00000349736 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
CSNK2A1-202ENST00000349736 CHMP7Q8WUX9 453 aaPredicted RBP13.48□□□□□ -0.25
CSNK2A1-202ENST00000349736 CADPSQ9ULU8 1353 aa13.48□□□□□ -0.25
CSNK2A1-202ENST00000349736 FOXD1Q16676 465 aa13.47□□□□□ -0.25
CSNK2A1-202ENST00000349736 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
CSNK2A1-202ENST00000349736 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
CSNK2A1-202ENST00000349736 NESP48681 1621 aa13.43□□□□□ -0.26
CSNK2A1-202ENST00000349736 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
CSNK2A1-202ENST00000349736 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
CSNK2A1-202ENST00000349736 NEFLP07196 543 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms