RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 NISCHQ9Y2I1 1504 aa52.5■■■■■ 6
TRIM8-202ENST00000462202 CCDC180Q9P1Z9 1646 aa46.67■■■■■ 5.06
TRIM8-202ENST00000462202 ABCC9O60706 1549 aa46.01■■■■■ 4.96
TRIM8-202ENST00000462202 DCAF8L2P0C7V8 631 aa44.25■■■■■ 4.67
TRIM8-202ENST00000462202 RB1CC1Q8TDY2 1594 aa44.09■■■■■ 4.65
TRIM8-202ENST00000462202 NACADO15069 1562 aa43.97■■■■■ 4.63
TRIM8-202ENST00000462202 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
TRIM8-202ENST00000462202 MYO15BQ96JP2 1530 aa43.56■■■■■ 4.56
TRIM8-202ENST00000462202 DCAF1Q9Y4B6 1507 aa43.34■■■■■ 4.53
TRIM8-202ENST00000462202 PABPN1Q86U42 306 aaKnown RBP eCLIP43.04■■■■■ 4.48
TRIM8-202ENST00000462202 UNC13AQ9UPW8 1703 aa42.98■■■■■ 4.47
TRIM8-202ENST00000462202 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
TRIM8-202ENST00000462202 BICRAQ9NZM4 1560 aa42.69■■■■■ 4.43
TRIM8-202ENST00000462202 DNAJC5BQ9UF47 199 aa42.31■■■■■ 4.36
TRIM8-202ENST00000462202 SHROOM4Q9ULL8 1493 aa42.19■■■■■ 4.34
TRIM8-202ENST00000462202 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.26
TRIM8-202ENST00000462202 CC2D2AQ9P2K1 1620 aa41.51■■■■■ 4.24
TRIM8-202ENST00000462202 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.2
TRIM8-202ENST00000462202 SMARCA4P51532 1647 aa40.78■■■■■ 4.12
TRIM8-202ENST00000462202 BAZ1AQ9NRL2 1556 aaPredicted RBP40.72■■■■■ 4.11
TRIM8-202ENST00000462202 ATAD2BQ9ULI0 1458 aa40.61■■■■■ 4.09
TRIM8-202ENST00000462202 NCAPD3P42695 1498 aa40.57■■■■■ 4.08
TRIM8-202ENST00000462202 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
TRIM8-202ENST00000462202 MROH2BQ7Z745 1585 aa40.5■■■■■ 4.07
TRIM8-202ENST00000462202 HMGXB3Q12766 1538 aa40.34■■■■■ 4.05
TRIM8-202ENST00000462202 BAZ1BQ9UIG0 1483 aaKnown RBP40.33■■■■■ 4.05
TRIM8-202ENST00000462202 PEG3Q9GZU2 1588 aa40.28■■■■■ 4.04
TRIM8-202ENST00000462202 WIZO95785 1651 aa40.05■■■■■ 4
TRIM8-202ENST00000462202 RSF1Q96T23 1441 aaPredicted RBP39.99■■■■□ 3.99
TRIM8-202ENST00000462202 NESP48681 1621 aa39.73■■■■□ 3.95
TRIM8-202ENST00000462202 ERCC6Q03468 1493 aa39.71■■■■□ 3.95
TRIM8-202ENST00000462202 TOP2AP11388 1531 aaKnown RBP39.6■■■■□ 3.93
TRIM8-202ENST00000462202 LAMC3Q9Y6N6 1575 aa39.53■■■■□ 3.92
TRIM8-202ENST00000462202 CADPSQ9ULU8 1353 aa39.44■■■■□ 3.9
TRIM8-202ENST00000462202 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
TRIM8-202ENST00000462202 CUX2O14529 1486 aa39.19■■■■□ 3.86
TRIM8-202ENST00000462202 KIF21AQ7Z4S6 1674 aa39.19■■■■□ 3.86
TRIM8-202ENST00000462202 CCDC88BA6NC98 1476 aa39.17■■■■□ 3.86
TRIM8-202ENST00000462202 CFTRP13569 1480 aa39.13■■■■□ 3.85
TRIM8-202ENST00000462202 SUPT5HO00267 1087 aaKnown RBP39.1■■■■□ 3.85
TRIM8-202ENST00000462202 THOC2Q8NI27 1593 aaKnown RBP39.07■■■■□ 3.84
TRIM8-202ENST00000462202 FANCD2Q9BXW9 1451 aa39.01■■■■□ 3.84
TRIM8-202ENST00000462202 CEP164Q9UPV0 1460 aa38.99■■■■□ 3.83
TRIM8-202ENST00000462202 MRC2Q9UBG0 1479 aa38.94■■■■□ 3.82
TRIM8-202ENST00000462202 WDR62O43379 1518 aa38.75■■■■□ 3.79
TRIM8-202ENST00000462202 PRDM2Q13029 1718 aa38.74■■■■□ 3.79
TRIM8-202ENST00000462202 URB2Q14146 1524 aaKnown RBP38.6■■■■□ 3.77
TRIM8-202ENST00000462202 TOPBP1Q92547 1522 aa38.35■■■■□ 3.73
TRIM8-202ENST00000462202 ABCC8Q09428 1581 aa38.31■■■■□ 3.72
TRIM8-202ENST00000462202 DNMBPQ6XZF7 1577 aa38.27■■■■□ 3.72
TRIM8-202ENST00000462202 DNAJC5Q9H3Z4 198 aa38.21■■■■□ 3.71
TRIM8-202ENST00000462202 IFT140Q96RY7 1462 aa38.15■■■■□ 3.7
TRIM8-202ENST00000462202 POLA1P09884 1462 aaPredicted RBP38.01■■■■□ 3.67
TRIM8-202ENST00000462202 ZNF608Q9ULD9 1512 aaPredicted RBP38.01■■■■□ 3.67
TRIM8-202ENST00000462202 CUX1P39880 1505 aa38■■■■□ 3.67
TRIM8-202ENST00000462202 FGD5Q6ZNL6 1462 aa37.93■■■■□ 3.66
TRIM8-202ENST00000462202 SOGA1O94964 1423 aa37.91■■■■□ 3.66
TRIM8-202ENST00000462202 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
TRIM8-202ENST00000462202 TARBP1Q13395 1621 aaKnown RBP37.87■■■■□ 3.65
TRIM8-202ENST00000462202 EIF4G3O43432 1585 aaKnown RBP37.82■■■■□ 3.65
TRIM8-202ENST00000462202 AQRO60306 1485 aaKnown RBP eCLIP37.81■■■■□ 3.644e-7■■■■■ 33.8
TRIM8-202ENST00000462202 TDRD9Q8NDG6 1382 aaKnown RBP37.75■■■■□ 3.63
TRIM8-202ENST00000462202 WRNQ14191 1432 aaPredicted RBP eCLIP37.75■■■■□ 3.63
TRIM8-202ENST00000462202 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
TRIM8-202ENST00000462202 SYNJ1O43426 1573 aa37.62■■■■□ 3.61
TRIM8-202ENST00000462202 TOP2BQ02880 1626 aa37.6■■■■□ 3.61
TRIM8-202ENST00000462202 BIVM-ERCC5R4GMW8 1640 aa37.57■■■■□ 3.6
TRIM8-202ENST00000462202 FBLN2P98095 1184 aa37.54■■■■□ 3.6
TRIM8-202ENST00000462202 WDR97A6NE52 1622 aa37.53■■■■□ 3.6
TRIM8-202ENST00000462202 ABCA10Q8WWZ4 1543 aa37.5■■■■□ 3.59
TRIM8-202ENST00000462202 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
TRIM8-202ENST00000462202 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
TRIM8-202ENST00000462202 GAPVD1Q14C86 1478 aa37.45■■■■□ 3.59
TRIM8-202ENST00000462202 CHD1O14646 1710 aa37.36■■■■□ 3.57
TRIM8-202ENST00000462202 CHMP7Q8WUX9 453 aaPredicted RBP37.34■■■■□ 3.57
TRIM8-202ENST00000462202 MAGI1Q96QZ7 1491 aaPredicted RBP37.33■■■■□ 3.57
TRIM8-202ENST00000462202 ABCA5Q8WWZ7 1642 aa37.33■■■■□ 3.57
TRIM8-202ENST00000462202 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
TRIM8-202ENST00000462202 SYNJ2O15056 1496 aa37.21■■■■□ 3.55
TRIM8-202ENST00000462202 TRIM41Q8WV44 630 aa37.11■■■■□ 3.53
TRIM8-202ENST00000462202 ERICH3Q5RHP9 1530 aa37.04■■■■□ 3.52
TRIM8-202ENST00000462202 ADAMTS12P58397 1594 aa37.03■■■■□ 3.52
TRIM8-202ENST00000462202 FHAD1B1AJZ9 1412 aa37■■■■□ 3.51
TRIM8-202ENST00000462202 KIF27Q86VH2 1401 aa36.99■■■■□ 3.51
TRIM8-202ENST00000462202 RIMBP3CA6NJZ7 1639 aa36.99■■■■□ 3.51
TRIM8-202ENST00000462202 RIMBP3BA6NNM3 1639 aa36.99■■■■□ 3.51
TRIM8-202ENST00000462202 RIMBP3Q9UFD9 1639 aa36.99■■■■□ 3.51
TRIM8-202ENST00000462202 ARHGEF11O15085 1522 aa36.98■■■■□ 3.51
TRIM8-202ENST00000462202 GRIN2AQ12879 1464 aa36.96■■■■□ 3.51
TRIM8-202ENST00000462202 CLASP1Q7Z460 1538 aa36.92■■■■□ 3.5
TRIM8-202ENST00000462202 IGF1RP08069 1367 aa36.81■■■■□ 3.48
TRIM8-202ENST00000462202 CYB5RLQ6IPT4 315 aa36.78■■■■□ 3.48
TRIM8-202ENST00000462202 CEP170Q5SW79 1584 aa36.76■■■■□ 3.48
TRIM8-202ENST00000462202 NUP160Q12769 1436 aa36.76■■■■□ 3.47
TRIM8-202ENST00000462202 CUL7Q14999 1698 aa36.68■■■■□ 3.46
TRIM8-202ENST00000462202 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
TRIM8-202ENST00000462202 CARMIL1Q5VZK9 1371 aa36.64■■■■□ 3.46
TRIM8-202ENST00000462202 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
TRIM8-202ENST00000462202 JPH4Q96JJ6 628 aa36.48■■■■□ 3.43
TRIM8-202ENST00000462202 ERCC6L2Q5T890 1561 aa36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms