Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 FAM220CP-201ENST00000395253 831 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 AC007967.3-201ENST00000434308 558 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 DDX43P3-201ENST00000441064 443 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 KRT126P-201ENST00000549467 1181 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 AC011467.2-201ENST00000598425 242 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 AC009949.1-201ENST00000623048 1830 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.72■□□□□ 0.11
APH1AQ96BI3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
APH1AQ96BI3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APH1AQ96BI3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 RCN1P2-201ENST00000398357 915 ntBASIC15.71■□□□□ 0.11
APH1AQ96BI3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 AL591684.3-201ENST00000605187 298 ntBASIC15.71■□□□□ 0.11
APH1AQ96BI3 AL732292.2-201ENST00000609649 430 ntBASIC15.71■□□□□ 0.11
APH1AQ96BI3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.71■□□□□ 0.11
APH1AQ96BI3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
APH1AQ96BI3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.71■□□□□ 0.1
APH1AQ96BI3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APH1AQ96BI3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
APH1AQ96BI3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
APH1AQ96BI3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.71■□□□□ 0.1
APH1AQ96BI3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APH1AQ96BI3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
APH1AQ96BI3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
APH1AQ96BI3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 BX276092.7-203ENST00000637198 1536 ntBASIC15.7■□□□□ 0.1
APH1AQ96BI3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.7■□□□□ 0.1
APH1AQ96BI3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APH1AQ96BI3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms