Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN2P57739 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDN2P57739 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN2P57739 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.47■□□□□ 0.39
CLDN2P57739 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 AL049757.1-201ENST00000616842 1596 ntBASIC17.47■□□□□ 0.39
CLDN2P57739 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN2P57739 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CLDN2P57739 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN2P57739 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN2P57739 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN2P57739 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN2P57739 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN2P57739 LAGE3P1-201ENST00000425356 484 ntBASIC17.46■□□□□ 0.39
CLDN2P57739 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN2P57739 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 AC145285.3-201ENST00000564603 959 ntBASIC17.46■□□□□ 0.39
CLDN2P57739 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN2P57739 AC073592.4-201ENST00000623827 446 ntBASIC17.46■□□□□ 0.39
CLDN2P57739 AC117500.6-201ENST00000624871 588 ntBASIC17.46■□□□□ 0.39
CLDN2P57739 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN2P57739 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN2P57739 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN2P57739 AC132938.5-201ENST00000624980 1813 ntBASIC17.46■□□□□ 0.39
CLDN2P57739 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN2P57739 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN2P57739 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN2P57739 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN2P57739 PMS2P7-201ENST00000506558 1336 ntBASIC17.46■□□□□ 0.38
CLDN2P57739 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN2P57739 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN2P57739 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 AC034105.1-201ENST00000563488 319 ntBASIC17.45■□□□□ 0.38
CLDN2P57739 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN2P57739 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN2P57739 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN2P57739 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN2P57739 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLDN2P57739 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN2P57739 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN2P57739 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN2P57739 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 AL353593.2-201ENST00000602529 1483 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN2P57739 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 AC148477.5-201ENST00000625164 1645 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms