Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AC012640.2-201ENST00000561606 901 ntBASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 NKAPP1-205ENST00000585790 367 ntBASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AL139288.1-201ENST00000623748 933 ntBASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AP000867.4-201ENST00000641616 219 ntBASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 AC097374.2-201ENST00000618617 1306 ntBASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHKBP1Q8TBC3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 MIR940-201ENST00000401276 94 ntBASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 IGHV3-22-201ENST00000520721 359 ntBASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 OR7E14P-202ENST00000530490 1290 ntBASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SHKBP1Q8TBC3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 ZNF259P1-201ENST00000407656 1365 ntBASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 KRT18P13-201ENST00000400056 1290 ntBASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SHKBP1Q8TBC3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 PHGDH-209ENST00000641074 1780 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 HLA-J-201ENST00000462773 1622 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 KRT8P47-201ENST00000604727 1398 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC096633.1-201ENST00000422446 749 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 TERC-201ENST00000602385 541 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 AC139530.3-201ENST00000620344 690 ntBASIC18.6■□□□□ 0.57
SHKBP1Q8TBC3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms