Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCC3P46736 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRCC3P46736 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 AC148477.5-201ENST00000625164 1645 ntBASIC18.85■□□□□ 0.61
BRCC3P46736 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.84■□□□□ 0.61
BRCC3P46736 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
BRCC3P46736 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.84■□□□□ 0.61
BRCC3P46736 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 SIGLEC16-201ENST00000599858 1437 ntBASIC18.84■□□□□ 0.61
BRCC3P46736 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.84■□□□□ 0.61
BRCC3P46736 PMS2P1-201ENST00000431037 1228 ntBASIC18.84■□□□□ 0.61
BRCC3P46736 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.84■□□□□ 0.61
BRCC3P46736 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.84■□□□□ 0.61
BRCC3P46736 POLD2P1-201ENST00000511220 997 ntBASIC18.84■□□□□ 0.61
BRCC3P46736 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.84■□□□□ 0.61
BRCC3P46736 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.84■□□□□ 0.61
BRCC3P46736 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRCC3P46736 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.84■□□□□ 0.61
BRCC3P46736 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCC3P46736 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
BRCC3P46736 AC104109.2-201ENST00000602919 1418 ntBASIC18.83■□□□□ 0.61
BRCC3P46736 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.83■□□□□ 0.61
BRCC3P46736 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCC3P46736 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCC3P46736 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRCC3P46736 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCC3P46736 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.83■□□□□ 0.61
BRCC3P46736 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 MIR940-201ENST00000401276 94 ntBASIC18.83■□□□□ 0.6
BRCC3P46736 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.83■□□□□ 0.6
BRCC3P46736 DDX43P3-201ENST00000441064 443 ntBASIC18.83■□□□□ 0.6
BRCC3P46736 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 AC105339.3-201ENST00000560043 636 ntBASIC18.83■□□□□ 0.6
BRCC3P46736 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCC3P46736 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BRCC3P46736 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCC3P46736 BX276092.7-203ENST00000637198 1536 ntBASIC18.83■□□□□ 0.6
BRCC3P46736 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCC3P46736 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCC3P46736 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
BRCC3P46736 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCC3P46736 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.82■□□□□ 0.6
BRCC3P46736 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
BRCC3P46736 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCC3P46736 AL020989.1-201ENST00000422979 469 ntBASIC18.82■□□□□ 0.6
BRCC3P46736 LAGE3P1-201ENST00000425356 484 ntBASIC18.82■□□□□ 0.6
BRCC3P46736 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 KRT18P58-201ENST00000527480 1120 ntBASIC18.82■□□□□ 0.6
BRCC3P46736 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.82■□□□□ 0.6
BRCC3P46736 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
BRCC3P46736 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCC3P46736 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCC3P46736 FLJ13224-201ENST00000313737 1514 ntBASIC18.82■□□□□ 0.6
BRCC3P46736 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.82■□□□□ 0.6
BRCC3P46736 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms