Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 MESTP1-201ENST00000404287 994 ntBASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.67■□□□□ 0.42
CKAP2Q8WWK9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 MIR3180-4-201ENST00000582223 153 ntBASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.66■□□□□ 0.42
CKAP2Q8WWK9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 AC008741.2-201ENST00000612792 3115 ntBASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.65■□□□□ 0.42
CKAP2Q8WWK9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms