RNA–Protein interactions for RNA: ENST00000582223.1

MIR3180-4-201, Transcript of microRNA 3180-4, humanhuman

BASIC

Gene MIR3180-4, Length 153 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3180-4-201ENST00000582223 NISCHQ9Y2I1 1504 aa43.79■■■■■ 4.6
MIR3180-4-201ENST00000582223 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
MIR3180-4-201ENST00000582223 ABCC9O60706 1549 aa37.13■■■■□ 3.53
MIR3180-4-201ENST00000582223 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
MIR3180-4-201ENST00000582223 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
MIR3180-4-201ENST00000582223 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
MIR3180-4-201ENST00000582223 NACADO15069 1562 aa36.31■■■■□ 3.4
MIR3180-4-201ENST00000582223 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
MIR3180-4-201ENST00000582223 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
MIR3180-4-201ENST00000582223 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
MIR3180-4-201ENST00000582223 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
MIR3180-4-201ENST00000582223 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
MIR3180-4-201ENST00000582223 SHROOM4Q9ULL8 1493 aa34.93■■■■□ 3.18
MIR3180-4-201ENST00000582223 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
MIR3180-4-201ENST00000582223 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
MIR3180-4-201ENST00000582223 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
MIR3180-4-201ENST00000582223 CECR2Q9BXF3 1484 aa33.93■■■■□ 3.02
MIR3180-4-201ENST00000582223 SMARCA4P51532 1647 aa33.8■■■■□ 3
MIR3180-4-201ENST00000582223 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
MIR3180-4-201ENST00000582223 MROH2BQ7Z745 1585 aa33.66■■■□□ 2.98
MIR3180-4-201ENST00000582223 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
MIR3180-4-201ENST00000582223 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
MIR3180-4-201ENST00000582223 RSF1Q96T23 1441 aaPredicted RBP33.57■■■□□ 2.96
MIR3180-4-201ENST00000582223 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
MIR3180-4-201ENST00000582223 ATAD2BQ9ULI0 1458 aa33.53■■■□□ 2.96
MIR3180-4-201ENST00000582223 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
MIR3180-4-201ENST00000582223 HMGXB3Q12766 1538 aa33.37■■■□□ 2.93
MIR3180-4-201ENST00000582223 BAZ1BQ9UIG0 1483 aaKnown RBP33.26■■■□□ 2.92
MIR3180-4-201ENST00000582223 WIZO95785 1651 aa33.26■■■□□ 2.91
MIR3180-4-201ENST00000582223 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
MIR3180-4-201ENST00000582223 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
MIR3180-4-201ENST00000582223 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
MIR3180-4-201ENST00000582223 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
MIR3180-4-201ENST00000582223 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
MIR3180-4-201ENST00000582223 CFTRP13569 1480 aa32.46■■■□□ 2.79
MIR3180-4-201ENST00000582223 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
MIR3180-4-201ENST00000582223 NESP48681 1621 aa32.27■■■□□ 2.76
MIR3180-4-201ENST00000582223 PRDM2Q13029 1718 aa32.13■■■□□ 2.73
MIR3180-4-201ENST00000582223 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
MIR3180-4-201ENST00000582223 ERCC6Q03468 1493 aa32.04■■■□□ 2.72
MIR3180-4-201ENST00000582223 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
MIR3180-4-201ENST00000582223 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
MIR3180-4-201ENST00000582223 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
MIR3180-4-201ENST00000582223 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
MIR3180-4-201ENST00000582223 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
MIR3180-4-201ENST00000582223 WDR62O43379 1518 aa31.73■■■□□ 2.67
MIR3180-4-201ENST00000582223 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
MIR3180-4-201ENST00000582223 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
MIR3180-4-201ENST00000582223 WRNQ14191 1432 aaPredicted RBP eCLIP31.65■■■□□ 2.66
MIR3180-4-201ENST00000582223 CUX2O14529 1486 aa31.63■■■□□ 2.65
MIR3180-4-201ENST00000582223 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
MIR3180-4-201ENST00000582223 CUX1P39880 1505 aa31.56■■■□□ 2.64
MIR3180-4-201ENST00000582223 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
MIR3180-4-201ENST00000582223 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
MIR3180-4-201ENST00000582223 SYNJ1O43426 1573 aa31.42■■■□□ 2.62
MIR3180-4-201ENST00000582223 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
MIR3180-4-201ENST00000582223 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
MIR3180-4-201ENST00000582223 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
MIR3180-4-201ENST00000582223 SOGA1O94964 1423 aa31.31■■■□□ 2.6
MIR3180-4-201ENST00000582223 TRIM41Q8WV44 630 aa31.27■■■□□ 2.6
MIR3180-4-201ENST00000582223 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
MIR3180-4-201ENST00000582223 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
MIR3180-4-201ENST00000582223 ABCA10Q8WWZ4 1543 aa31.2■■■□□ 2.59
MIR3180-4-201ENST00000582223 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
MIR3180-4-201ENST00000582223 RAD54L2Q9Y4B4 1467 aa31.16■■■□□ 2.58
MIR3180-4-201ENST00000582223 ZNF608Q9ULD9 1512 aaPredicted RBP31.01■■■□□ 2.55
MIR3180-4-201ENST00000582223 KIF27Q86VH2 1401 aa30.99■■■□□ 2.55
MIR3180-4-201ENST00000582223 TDRD9Q8NDG6 1382 aaKnown RBP30.98■■■□□ 2.55
MIR3180-4-201ENST00000582223 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
MIR3180-4-201ENST00000582223 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.54
MIR3180-4-201ENST00000582223 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
MIR3180-4-201ENST00000582223 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.54
MIR3180-4-201ENST00000582223 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
MIR3180-4-201ENST00000582223 EEA1Q15075 1411 aa30.88■■■□□ 2.53
MIR3180-4-201ENST00000582223 ERICH3Q5RHP9 1530 aa30.85■■■□□ 2.53
MIR3180-4-201ENST00000582223 MAGI1Q96QZ7 1491 aaPredicted RBP30.8■■■□□ 2.52
MIR3180-4-201ENST00000582223 IGF1RP08069 1367 aa30.77■■■□□ 2.52
MIR3180-4-201ENST00000582223 PBRM1Q86U86 1689 aa30.72■■■□□ 2.51
MIR3180-4-201ENST00000582223 SNAPC4Q5SXM2 1469 aa30.69■■■□□ 2.5
MIR3180-4-201ENST00000582223 FHAD1B1AJZ9 1412 aa30.67■■■□□ 2.5
MIR3180-4-201ENST00000582223 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
MIR3180-4-201ENST00000582223 CUL7Q14999 1698 aa30.64■■■□□ 2.5
MIR3180-4-201ENST00000582223 SYNJ2O15056 1496 aa30.63■■■□□ 2.49
MIR3180-4-201ENST00000582223 CSRNP3Q8WYN3 585 aa30.63■■■□□ 2.49
MIR3180-4-201ENST00000582223 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
MIR3180-4-201ENST00000582223 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
MIR3180-4-201ENST00000582223 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
MIR3180-4-201ENST00000582223 PRXQ9BXM0 1461 aa30.53■■■□□ 2.48
MIR3180-4-201ENST00000582223 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
MIR3180-4-201ENST00000582223 GRIN2AQ12879 1464 aa30.47■■■□□ 2.47
MIR3180-4-201ENST00000582223 FBLN2P98095 1184 aa30.41■■■□□ 2.46
MIR3180-4-201ENST00000582223 FAM9AQ8IZU1 332 aaPredicted RBP30.4■■■□□ 2.46
MIR3180-4-201ENST00000582223 OSCARQ8IYS5 282 aa30.39■■■□□ 2.46
MIR3180-4-201ENST00000582223 KIF21BO75037 1637 aa30.37■■■□□ 2.45
MIR3180-4-201ENST00000582223 NUP160Q12769 1436 aa30.36■■■□□ 2.45
MIR3180-4-201ENST00000582223 CHD1O14646 1710 aa30.36■■■□□ 2.45
MIR3180-4-201ENST00000582223 GOLGA3Q08378 1498 aa30.25■■■□□ 2.43
MIR3180-4-201ENST00000582223 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
MIR3180-4-201ENST00000582223 CEP170Q5SW79 1584 aa30.21■■■□□ 2.43
MIR3180-4-201ENST00000582223 CLASP1Q7Z460 1538 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms