Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.73■□□□□ 0.75
CLSTN1O94985 AC010331.1-201ENST00000611423 582 ntBASIC19.73■□□□□ 0.75
CLSTN1O94985 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.73■□□□□ 0.75
CLSTN1O94985 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.73■□□□□ 0.75
CLSTN1O94985 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLSTN1O94985 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLSTN1O94985 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.72■□□□□ 0.75
CLSTN1O94985 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.72■□□□□ 0.75
CLSTN1O94985 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.72■□□□□ 0.75
CLSTN1O94985 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.72■□□□□ 0.75
CLSTN1O94985 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLSTN1O94985 ZNF444P1-201ENST00000559497 298 ntBASIC19.72■□□□□ 0.75
CLSTN1O94985 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.72■□□□□ 0.75
CLSTN1O94985 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLSTN1O94985 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLSTN1O94985 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CLSTN1O94985 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
CLSTN1O94985 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLSTN1O94985 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLSTN1O94985 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLSTN1O94985 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 SIRPAP1-201ENST00000448467 1770 ntBASIC19.71■□□□□ 0.75
CLSTN1O94985 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ARMC10P1-201ENST00000313754 855 ntBASIC19.71■□□□□ 0.75
CLSTN1O94985 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.71■□□□□ 0.75
CLSTN1O94985 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLSTN1O94985 SLC25A6P5-201ENST00000435663 894 ntBASIC19.71■□□□□ 0.75
CLSTN1O94985 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.71■□□□□ 0.75
CLSTN1O94985 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.71■□□□□ 0.75
CLSTN1O94985 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLSTN1O94985 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CLSTN1O94985 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLSTN1O94985 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLSTN1O94985 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 AC067852.2-201ENST00000590513 2313 ntBASIC19.7■□□□□ 0.74
CLSTN1O94985 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLSTN1O94985 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLSTN1O94985 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CLSTN1O94985 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.7■□□□□ 0.74
CLSTN1O94985 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.7■□□□□ 0.74
CLSTN1O94985 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.7■□□□□ 0.74
CLSTN1O94985 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLSTN1O94985 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms