Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC233263.1-201ENST00000578059 224 ntBASIC13.36□□□□□ -0.27
SNAI2O43623 AC110285.5-201ENST00000611501 352 ntBASIC13.36□□□□□ -0.27
SNAI2O43623 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.36□□□□□ -0.27
SNAI2O43623 AC008622.2-201ENST00000617006 1229 ntBASIC13.36□□□□□ -0.27
SNAI2O43623 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SNAI2O43623 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 KRT16P1-201ENST00000399124 1418 ntBASIC13.36□□□□□ -0.27
SNAI2O43623 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SNAI2O43623 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.36□□□□□ -0.27
SNAI2O43623 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.36□□□□□ -0.27
SNAI2O43623 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNAI2O43623 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SNAI2O43623 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.36□□□□□ -0.27
SNAI2O43623 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNAI2O43623 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SNAI2O43623 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 AL365209.1-201ENST00000624418 6473 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 AL023284.2-201ENST00000405850 579 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.35□□□□□ -0.27
SNAI2O43623 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 AC124016.1-201ENST00000609552 612 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 AL031985.4-201ENST00000642138 673 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SNAI2O43623 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SNAI2O43623 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 AC009102.3-201ENST00000623118 1491 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 AL023806.1-201ENST00000603994 1649 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 PP12613-201ENST00000424958 2230 ntBASIC13.35□□□□□ -0.27
SNAI2O43623 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNAI2O43623 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.35□□□□□ -0.27
SNAI2O43623 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 SDHAP2-201ENST00000455183 2001 ntBASIC13.34□□□□□ -0.27
SNAI2O43623 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 MIR149-201ENST00000384879 89 ntBASIC13.34□□□□□ -0.27
SNAI2O43623 AC008040.2-201ENST00000461049 708 ntBASIC13.34□□□□□ -0.27
SNAI2O43623 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.34□□□□□ -0.27
SNAI2O43623 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 AC130371.2-201ENST00000619443 611 ntBASIC13.34□□□□□ -0.27
SNAI2O43623 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SNAI2O43623 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.34□□□□□ -0.27
SNAI2O43623 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms