Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PTCH2Q9Y6C5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.28■■■□□ 2.12
PTCH2Q9Y6C5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
PTCH2Q9Y6C5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.27■■■□□ 2.12
PTCH2Q9Y6C5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
PTCH2Q9Y6C5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PTCH2Q9Y6C5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PTCH2Q9Y6C5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
PTCH2Q9Y6C5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.25■■■□□ 2.11
PTCH2Q9Y6C5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 AC019171.1-201ENST00000601251 1056 ntBASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 AC100797.4-201ENST00000631653 1827 ntBASIC28.24■■■□□ 2.11
PTCH2Q9Y6C5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.23■■■□□ 2.11
PTCH2Q9Y6C5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PTCH2Q9Y6C5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.23■■■□□ 2.11
PTCH2Q9Y6C5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.23■■■□□ 2.11
PTCH2Q9Y6C5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PTCH2Q9Y6C5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PTCH2Q9Y6C5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PTCH2Q9Y6C5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PTCH2Q9Y6C5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PTCH2Q9Y6C5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PTCH2Q9Y6C5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PTCH2Q9Y6C5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.2■■■□□ 2.1
PTCH2Q9Y6C5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PTCH2Q9Y6C5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PTCH2Q9Y6C5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PTCH2Q9Y6C5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
PTCH2Q9Y6C5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PTCH2Q9Y6C5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PTCH2Q9Y6C5 AP004833.2-201ENST00000532228 1454 ntBASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PTCH2Q9Y6C5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PTCH2Q9Y6C5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PTCH2Q9Y6C5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.14■■■□□ 2.1
PTCH2Q9Y6C5 UNC93B8-201ENST00000511903 705 ntBASIC28.14■■■□□ 2.1
PTCH2Q9Y6C5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.14■■■□□ 2.1
PTCH2Q9Y6C5 MIR4787-201ENST00000607364 84 ntBASIC28.14■■■□□ 2.1
PTCH2Q9Y6C5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.13■■■□□ 2.09
PTCH2Q9Y6C5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
PTCH2Q9Y6C5 KRT125P-201ENST00000546827 989 ntBASIC28.13■■■□□ 2.09
PTCH2Q9Y6C5 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.13■■■□□ 2.09
PTCH2Q9Y6C5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PTCH2Q9Y6C5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 LONRF2P2-201ENST00000439212 571 ntBASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 AC087393.1-201ENST00000582896 145 ntBASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 AL139246.5-201ENST00000606645 996 ntBASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.12■■■□□ 2.09
PTCH2Q9Y6C5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PTCH2Q9Y6C5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
PTCH2Q9Y6C5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 KRT16P3-201ENST00000439127 1283 ntBASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PTCH2Q9Y6C5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.08■■■□□ 2.09
PTCH2Q9Y6C5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
PTCH2Q9Y6C5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
PTCH2Q9Y6C5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
PTCH2Q9Y6C5 BX664725.1-201ENST00000438252 379 ntBASIC28.05■■■□□ 2.08
PTCH2Q9Y6C5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
PTCH2Q9Y6C5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.05■■■□□ 2.08
PTCH2Q9Y6C5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 AL359504.2-201ENST00000605506 1601 ntBASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms