Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHGC4Q9Y5F7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC4Q9Y5F7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHGC4Q9Y5F7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC4Q9Y5F7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGC4Q9Y5F7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC4Q9Y5F7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC4Q9Y5F7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGC4Q9Y5F7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHGC4Q9Y5F7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PCDHGC4Q9Y5F7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 RARRES2P2-201ENST00000394842 485 ntBASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.84■■□□□ 1.57
PCDHGC4Q9Y5F7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGC4Q9Y5F7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGC4Q9Y5F7 AC142472.1-201ENST00000612013 1741 ntBASIC24.83■■□□□ 1.57
PCDHGC4Q9Y5F7 SMPD5-203ENST00000639008 1464 ntBASIC24.83■■□□□ 1.56
PCDHGC4Q9Y5F7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGC4Q9Y5F7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
PCDHGC4Q9Y5F7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGC4Q9Y5F7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGC4Q9Y5F7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGC4Q9Y5F7 AC025884.2-201ENST00000553429 711 ntBASIC24.8■■□□□ 1.56
PCDHGC4Q9Y5F7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHGC4Q9Y5F7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGC4Q9Y5F7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGC4Q9Y5F7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHGC4Q9Y5F7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHGC4Q9Y5F7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC4Q9Y5F7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHGC4Q9Y5F7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC4Q9Y5F7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGC4Q9Y5F7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGC4Q9Y5F7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGC4Q9Y5F7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGC4Q9Y5F7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC4Q9Y5F7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC4Q9Y5F7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC4Q9Y5F7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGC4Q9Y5F7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHGC4Q9Y5F7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 AC007029.1-201ENST00000604183 313 ntBASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.73■■□□□ 1.55
PCDHGC4Q9Y5F7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGC4Q9Y5F7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHGC4Q9Y5F7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHGC4Q9Y5F7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHGC4Q9Y5F7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHGC4Q9Y5F7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC4Q9Y5F7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGC4Q9Y5F7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHGC4Q9Y5F7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
PCDHGC4Q9Y5F7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGC4Q9Y5F7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGC4Q9Y5F7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHGC4Q9Y5F7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHGC4Q9Y5F7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDHGC4Q9Y5F7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHGC4Q9Y5F7 MIR3960-201ENST00000583311 91 ntBASIC24.69■■□□□ 1.54
PCDHGC4Q9Y5F7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGC4Q9Y5F7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDHGC4Q9Y5F7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 RP9P-202ENST00000450133 1212 ntBASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGC4Q9Y5F7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGC4Q9Y5F7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms