Protein–RNA interactions for Protein: Q9NPI1

BRD7, Bromodomain-containing protein 7, humanhuman

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7Q9NPI1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.73■■□□□ 1.07
BRD7Q9NPI1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.73■■□□□ 1.07
BRD7Q9NPI1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRD7Q9NPI1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRD7Q9NPI1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.72■■□□□ 1.07
BRD7Q9NPI1 AP004609.3-201ENST00000610705 1884 ntBASIC21.72■■□□□ 1.07
BRD7Q9NPI1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRD7Q9NPI1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRD7Q9NPI1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.07
BRD7Q9NPI1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRD7Q9NPI1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRD7Q9NPI1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRD7Q9NPI1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
BRD7Q9NPI1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
BRD7Q9NPI1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.69■■□□□ 1.06
BRD7Q9NPI1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRD7Q9NPI1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
BRD7Q9NPI1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD7Q9NPI1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD7Q9NPI1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
BRD7Q9NPI1 AC092803.2-201ENST00000564287 1899 ntBASIC21.68■■□□□ 1.06
BRD7Q9NPI1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.68■■□□□ 1.06
BRD7Q9NPI1 AC093323.1-202ENST00000635031 2045 ntBASIC21.67■■□□□ 1.06
BRD7Q9NPI1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.67■■□□□ 1.06
BRD7Q9NPI1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.67■■□□□ 1.06
BRD7Q9NPI1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRD7Q9NPI1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
BRD7Q9NPI1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 LINC01971-201ENST00000617888 1048 ntBASIC21.65■■□□□ 1.06
BRD7Q9NPI1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD7Q9NPI1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRD7Q9NPI1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD7Q9NPI1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD7Q9NPI1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD7Q9NPI1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.64■■□□□ 1.05
BRD7Q9NPI1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD7Q9NPI1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.63■■□□□ 1.05
BRD7Q9NPI1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD7Q9NPI1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
BRD7Q9NPI1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
BRD7Q9NPI1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD7Q9NPI1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
BRD7Q9NPI1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD7Q9NPI1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.62■■□□□ 1.05
BRD7Q9NPI1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD7Q9NPI1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD7Q9NPI1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD7Q9NPI1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.61■■□□□ 1.05
BRD7Q9NPI1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD7Q9NPI1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRD7Q9NPI1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRD7Q9NPI1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRD7Q9NPI1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD7Q9NPI1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.6■■□□□ 1.05
BRD7Q9NPI1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.6■■□□□ 1.05
BRD7Q9NPI1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRD7Q9NPI1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD7Q9NPI1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRD7Q9NPI1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
BRD7Q9NPI1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD7Q9NPI1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L13-201ENST00000554103 1267 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L15-201ENST00000611059 1267 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L23-201ENST00000615195 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L24-201ENST00000617576 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L22-201ENST00000618238 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L20-201ENST00000619712 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L21-201ENST00000622058 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L10-201ENST00000622460 1267 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 DUX4L25-201ENST00000624915 1269 ntBASIC21.59■■□□□ 1.05
BRD7Q9NPI1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 DUX4L11-201ENST00000611504 1267 ntBASIC21.58■■□□□ 1.05
BRD7Q9NPI1 DUX4L12-201ENST00000614593 1267 ntBASIC21.58■■□□□ 1.05
BRD7Q9NPI1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.58■■□□□ 1.05
BRD7Q9NPI1 DUX4L14-201ENST00000621227 1267 ntBASIC21.58■■□□□ 1.05
BRD7Q9NPI1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms