Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX1Q92499 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX1Q92499 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX1Q92499 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX1Q92499 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
DDX1Q92499 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX1Q92499 AC091060.1-201ENST00000623524 1766 ntBASIC26.26■■□□□ 1.79
DDX1Q92499 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX1Q92499 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
DDX1Q92499 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX1Q92499 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX1Q92499 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
DDX1Q92499 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
DDX1Q92499 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX1Q92499 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX1Q92499 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX1Q92499 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX1Q92499 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.23■■□□□ 1.79
DDX1Q92499 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX1Q92499 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.23■■□□□ 1.79
DDX1Q92499 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX1Q92499 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX1Q92499 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX1Q92499 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX1Q92499 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.21■■□□□ 1.79
DDX1Q92499 AL359258.2-201ENST00000564063 1566 ntBASIC26.2■■□□□ 1.79
DDX1Q92499 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX1Q92499 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX1Q92499 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.2■■□□□ 1.78
DDX1Q92499 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
DDX1Q92499 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX1Q92499 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX1Q92499 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.19■■□□□ 1.78
DDX1Q92499 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX1Q92499 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
DDX1Q92499 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX1Q92499 RNF126P1-201ENST00000567452 1320 ntBASIC26.18■■□□□ 1.78
DDX1Q92499 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX1Q92499 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX1Q92499 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
DDX1Q92499 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX1Q92499 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX1Q92499 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX1Q92499 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX1Q92499 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
DDX1Q92499 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX1Q92499 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX1Q92499 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX1Q92499 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX1Q92499 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX1Q92499 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX1Q92499 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX1Q92499 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
DDX1Q92499 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.14■■□□□ 1.78
DDX1Q92499 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
DDX1Q92499 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
DDX1Q92499 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX1Q92499 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX1Q92499 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
DDX1Q92499 GPX1-201ENST00000419349 1106 ntBASIC26.13■■□□□ 1.77
DDX1Q92499 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX1Q92499 AC012354.3-201ENST00000623734 483 ntBASIC26.12■■□□□ 1.77
DDX1Q92499 AC092803.2-201ENST00000564287 1899 ntBASIC26.12■■□□□ 1.77
DDX1Q92499 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX1Q92499 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX1Q92499 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
DDX1Q92499 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX1Q92499 AL359504.2-201ENST00000605506 1601 ntBASIC26.1■■□□□ 1.77
DDX1Q92499 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX1Q92499 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
DDX1Q92499 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
DDX1Q92499 AC145676.1-201ENST00000514988 2004 ntBASIC26.1■■□□□ 1.77
DDX1Q92499 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX1Q92499 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.09■■□□□ 1.77
DDX1Q92499 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX1Q92499 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms