Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB40AQ8WXH6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB40AQ8WXH6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB40AQ8WXH6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 AC016575.1-201ENST00000607026 382 ntBASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB40AQ8WXH6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40AQ8WXH6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB40AQ8WXH6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.4■■□□□ 1.02
RAB40AQ8WXH6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB40AQ8WXH6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB40AQ8WXH6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L13-201ENST00000554103 1267 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L15-201ENST00000611059 1267 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L23-201ENST00000615195 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L24-201ENST00000617576 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L22-201ENST00000618238 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L20-201ENST00000619712 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L21-201ENST00000622058 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L10-201ENST00000622460 1267 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 DUX4L25-201ENST00000624915 1269 ntBASIC21.39■■□□□ 1.01
RAB40AQ8WXH6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 MIR639-201ENST00000384974 98 ntBASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 CR559946.2-201ENST00000623684 991 ntBASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 AP004609.3-201ENST00000610705 1884 ntBASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.38■■□□□ 1.01
RAB40AQ8WXH6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 AC135983.2-203ENST00000454486 1613 ntBASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAB40AQ8WXH6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB40AQ8WXH6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAB40AQ8WXH6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB40AQ8WXH6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB40AQ8WXH6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB40AQ8WXH6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB40AQ8WXH6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAB40AQ8WXH6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.31■■□□□ 1
RAB40AQ8WXH6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.31■■□□□ 1
RAB40AQ8WXH6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.31■■□□□ 1
RAB40AQ8WXH6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RAB40AQ8WXH6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB40AQ8WXH6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAB40AQ8WXH6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.3■■□□□ 1
RAB40AQ8WXH6 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.3■■□□□ 1
RAB40AQ8WXH6 MIR4449-201ENST00000578365 66 ntBASIC21.3■■□□□ 1
RAB40AQ8WXH6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.29■■□□□ 1
RAB40AQ8WXH6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RAB40AQ8WXH6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAB40AQ8WXH6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB40AQ8WXH6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB40AQ8WXH6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.29■■□□□ 1
RAB40AQ8WXH6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB40AQ8WXH6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.28■■□□□ 1
RAB40AQ8WXH6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB40AQ8WXH6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB40AQ8WXH6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.28■■□□□ 1
RAB40AQ8WXH6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms