Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SMPD5-203ENST00000639008 1464 ntBASIC25.79■■□□□ 1.72
RNF139Q8WU17 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF139Q8WU17 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.78■■□□□ 1.72
RNF139Q8WU17 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF139Q8WU17 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RNF139Q8WU17 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF139Q8WU17 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RNF139Q8WU17 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.78■■□□□ 1.72
RNF139Q8WU17 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF139Q8WU17 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.77■■□□□ 1.72
RNF139Q8WU17 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
RNF139Q8WU17 ABHD17AP5-201ENST00000580133 923 ntBASIC25.77■■□□□ 1.72
RNF139Q8WU17 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF139Q8WU17 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
RNF139Q8WU17 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RNF139Q8WU17 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RNF139Q8WU17 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF139Q8WU17 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
RNF139Q8WU17 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF139Q8WU17 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF139Q8WU17 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF139Q8WU17 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF139Q8WU17 AL359504.2-201ENST00000605506 1601 ntBASIC25.74■■□□□ 1.71
RNF139Q8WU17 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF139Q8WU17 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF139Q8WU17 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.74■■□□□ 1.71
RNF139Q8WU17 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF139Q8WU17 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RNF139Q8WU17 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF139Q8WU17 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.73■■□□□ 1.71
RNF139Q8WU17 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
RNF139Q8WU17 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.73■■□□□ 1.71
RNF139Q8WU17 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.73■■□□□ 1.71
RNF139Q8WU17 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF139Q8WU17 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF139Q8WU17 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF139Q8WU17 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF139Q8WU17 AC025884.2-201ENST00000553429 711 ntBASIC25.71■■□□□ 1.71
RNF139Q8WU17 AC007029.1-201ENST00000604183 313 ntBASIC25.71■■□□□ 1.71
RNF139Q8WU17 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF139Q8WU17 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF139Q8WU17 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF139Q8WU17 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF139Q8WU17 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
RNF139Q8WU17 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF139Q8WU17 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF139Q8WU17 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.7■■□□□ 1.7
RNF139Q8WU17 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RNF139Q8WU17 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF139Q8WU17 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RNF139Q8WU17 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.68■■□□□ 1.7
RNF139Q8WU17 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.68■■□□□ 1.7
RNF139Q8WU17 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF139Q8WU17 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.68■■□□□ 1.7
RNF139Q8WU17 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF139Q8WU17 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF139Q8WU17 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF139Q8WU17 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
RNF139Q8WU17 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.67■■□□□ 1.7
RNF139Q8WU17 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
RNF139Q8WU17 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF139Q8WU17 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF139Q8WU17 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF139Q8WU17 MIR3960-201ENST00000583311 91 ntBASIC25.66■■□□□ 1.7
RNF139Q8WU17 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF139Q8WU17 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RNF139Q8WU17 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.65■■□□□ 1.7
RNF139Q8WU17 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF139Q8WU17 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF139Q8WU17 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF139Q8WU17 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF139Q8WU17 RP9P-202ENST00000450133 1212 ntBASIC25.64■■□□□ 1.7
RNF139Q8WU17 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.64■■□□□ 1.7
RNF139Q8WU17 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.64■■□□□ 1.69
RNF139Q8WU17 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF139Q8WU17 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF139Q8WU17 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
RNF139Q8WU17 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF139Q8WU17 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF139Q8WU17 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF139Q8WU17 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF139Q8WU17 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF139Q8WU17 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF139Q8WU17 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF139Q8WU17 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF139Q8WU17 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF139Q8WU17 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RNF139Q8WU17 AP004609.3-201ENST00000610705 1884 ntBASIC25.61■■□□□ 1.69
RNF139Q8WU17 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF139Q8WU17 AC142472.1-201ENST00000612013 1741 ntBASIC25.6■■□□□ 1.69
RNF139Q8WU17 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF139Q8WU17 NTF6A-201ENST00000591175 560 ntBASIC25.6■■□□□ 1.69
RNF139Q8WU17 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF139Q8WU17 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
RNF139Q8WU17 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF139Q8WU17 AC093536.1-201ENST00000569153 554 ntBASIC25.59■■□□□ 1.69
RNF139Q8WU17 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF139Q8WU17 U85056.1-201ENST00000616429 682 ntBASIC25.59■■□□□ 1.69
RNF139Q8WU17 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF139Q8WU17 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms