Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB1AP62820 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.52■■□□□ 1.04
RAB1AP62820 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.52■■□□□ 1.04
RAB1AP62820 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.52■■□□□ 1.04
RAB1AP62820 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAB1AP62820 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAB1AP62820 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB1AP62820 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB1AP62820 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAB1AP62820 AP004609.3-201ENST00000610705 1884 ntBASIC21.5■■□□□ 1.03
RAB1AP62820 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB1AP62820 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.5■■□□□ 1.03
RAB1AP62820 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.49■■□□□ 1.03
RAB1AP62820 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB1AP62820 AC092296.2-201ENST00000589470 999 ntBASIC21.49■■□□□ 1.03
RAB1AP62820 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB1AP62820 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB1AP62820 AL359504.2-201ENST00000605506 1601 ntBASIC21.48■■□□□ 1.03
RAB1AP62820 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.48■■□□□ 1.03
RAB1AP62820 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB1AP62820 HSD17B1P1-201ENST00000590052 955 ntBASIC21.48■■□□□ 1.03
RAB1AP62820 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB1AP62820 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB1AP62820 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB1AP62820 AL157400.5-201ENST00000507624 621 ntBASIC21.47■■□□□ 1.03
RAB1AP62820 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB1AP62820 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB1AP62820 AC142472.1-201ENST00000612013 1741 ntBASIC21.46■■□□□ 1.03
RAB1AP62820 ECEL1P2-201ENST00000461596 1295 ntBASIC21.46■■□□□ 1.03
RAB1AP62820 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1AP62820 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAB1AP62820 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB1AP62820 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RAB1AP62820 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1AP62820 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1AP62820 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB1AP62820 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1AP62820 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1AP62820 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
RAB1AP62820 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1AP62820 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB1AP62820 RNF126P1-201ENST00000567452 1320 ntBASIC21.44■■□□□ 1.02
RAB1AP62820 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB1AP62820 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAB1AP62820 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB1AP62820 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1AP62820 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1AP62820 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB1AP62820 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1AP62820 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB1AP62820 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB1AP62820 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB1AP62820 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB1AP62820 SMPD5-203ENST00000639008 1464 ntBASIC21.42■■□□□ 1.02
RAB1AP62820 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB1AP62820 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
RAB1AP62820 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB1AP62820 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB1AP62820 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.4■■□□□ 1.02
RAB1AP62820 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB1AP62820 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB1AP62820 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB1AP62820 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB1AP62820 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB1AP62820 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB1AP62820 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RAB1AP62820 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB1AP62820 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
RAB1AP62820 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.38■■□□□ 1.01
RAB1AP62820 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB1AP62820 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB1AP62820 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB1AP62820 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB1AP62820 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB1AP62820 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB1AP62820 AC025884.2-201ENST00000553429 711 ntBASIC21.37■■□□□ 1.01
RAB1AP62820 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB1AP62820 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.37■■□□□ 1.01
RAB1AP62820 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAB1AP62820 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB1AP62820 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.36■■□□□ 1.01
RAB1AP62820 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RAB1AP62820 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
RAB1AP62820 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB1AP62820 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB1AP62820 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB1AP62820 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB1AP62820 RARRES2P2-201ENST00000394842 485 ntBASIC21.35■■□□□ 1.01
RAB1AP62820 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.35■■□□□ 1.01
RAB1AP62820 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.35■■□□□ 1.01
RAB1AP62820 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.35■■□□□ 1.01
RAB1AP62820 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB1AP62820 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB1AP62820 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB1AP62820 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms