Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCL5P42830 AC093323.1-202ENST00000635031 2045 ntBASIC16.38■□□□□ 0.21
CXCL5P42830 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCL5P42830 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCL5P42830 MIR3665-201ENST00000578708 105 ntBASIC16.37■□□□□ 0.21
CXCL5P42830 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL5P42830 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 WHAMMP3-201ENST00000611636 1609 ntBASIC16.36■□□□□ 0.21
CXCL5P42830 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL5P42830 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL5P42830 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.34■□□□□ 0.21
CXCL5P42830 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL5P42830 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 AC110285.7-201ENST00000624417 1536 ntBASIC16.34■□□□□ 0.21
CXCL5P42830 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL5P42830 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL5P42830 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL5P42830 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 LINC00543-201ENST00000567234 1845 ntBASIC16.33■□□□□ 0.2
CXCL5P42830 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL5P42830 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL5P42830 DUX4L28-201ENST00000623687 678 ntBASIC16.32■□□□□ 0.2
CXCL5P42830 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CXCL5P42830 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CXCL5P42830 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCL5P42830 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CXCL5P42830 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 AP006261.1-201ENST00000584783 668 ntBASIC16.3■□□□□ 0.2
CXCL5P42830 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL5P42830 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL5P42830 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCL5P42830 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CXCL5P42830 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCL5P42830 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCL5P42830 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms