Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
KCNA3P22001 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.86■■■□□ 2.53
KCNA3P22001 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
KCNA3P22001 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
KCNA3P22001 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
KCNA3P22001 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
KCNA3P22001 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
KCNA3P22001 Z92544.1-202ENST00000571933 1220 ntBASIC30.85■■■□□ 2.53
KCNA3P22001 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
KCNA3P22001 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.83■■■□□ 2.53
KCNA3P22001 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
KCNA3P22001 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
KCNA3P22001 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
KCNA3P22001 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.82■■■□□ 2.52
KCNA3P22001 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
KCNA3P22001 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
KCNA3P22001 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
KCNA3P22001 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.81■■■□□ 2.52
KCNA3P22001 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.8■■■□□ 2.52
KCNA3P22001 MIR638-201ENST00000385237 100 ntBASIC30.8■■■□□ 2.52
KCNA3P22001 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.8■■■□□ 2.52
KCNA3P22001 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
KCNA3P22001 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
KCNA3P22001 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
KCNA3P22001 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
KCNA3P22001 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.79■■■□□ 2.52
KCNA3P22001 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.79■■■□□ 2.52
KCNA3P22001 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
KCNA3P22001 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
KCNA3P22001 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
KCNA3P22001 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KCNA3P22001 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
KCNA3P22001 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.77■■■□□ 2.52
KCNA3P22001 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KCNA3P22001 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
KCNA3P22001 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
KCNA3P22001 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.76■■■□□ 2.51
KCNA3P22001 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.76■■■□□ 2.51
KCNA3P22001 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.76■■■□□ 2.51
KCNA3P22001 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
KCNA3P22001 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
KCNA3P22001 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.76■■■□□ 2.51
KCNA3P22001 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KCNA3P22001 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
KCNA3P22001 AC087393.1-201ENST00000582896 145 ntBASIC30.75■■■□□ 2.51
KCNA3P22001 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KCNA3P22001 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
KCNA3P22001 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
KCNA3P22001 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.74■■■□□ 2.51
KCNA3P22001 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.74■■■□□ 2.51
KCNA3P22001 AL359504.2-201ENST00000605506 1601 ntBASIC30.73■■■□□ 2.51
KCNA3P22001 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
KCNA3P22001 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
KCNA3P22001 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
KCNA3P22001 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.72■■■□□ 2.51
KCNA3P22001 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
KCNA3P22001 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
KCNA3P22001 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
KCNA3P22001 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
KCNA3P22001 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.7■■■□□ 2.51
KCNA3P22001 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
KCNA3P22001 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.69■■■□□ 2.5
KCNA3P22001 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
KCNA3P22001 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
KCNA3P22001 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
KCNA3P22001 LONRF2P2-201ENST00000439212 571 ntBASIC30.68■■■□□ 2.5
KCNA3P22001 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
KCNA3P22001 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.68■■■□□ 2.5
KCNA3P22001 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.67■■■□□ 2.5
KCNA3P22001 UNC93B8-201ENST00000511903 705 ntBASIC30.67■■■□□ 2.5
KCNA3P22001 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.67■■■□□ 2.5
KCNA3P22001 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.67■■■□□ 2.5
KCNA3P22001 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KCNA3P22001 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
KCNA3P22001 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KCNA3P22001 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
KCNA3P22001 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNA3P22001 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.65■■■□□ 2.5
KCNA3P22001 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.65■■■□□ 2.5
KCNA3P22001 MIR4787-201ENST00000607364 84 ntBASIC30.65■■■□□ 2.5
KCNA3P22001 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNA3P22001 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KCNA3P22001 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
KCNA3P22001 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
KCNA3P22001 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.64■■■□□ 2.5
KCNA3P22001 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
KCNA3P22001 ST7-AS1-201ENST00000456775 1889 ntBASIC30.63■■■□□ 2.49
KCNA3P22001 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KCNA3P22001 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KCNA3P22001 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.62■■■□□ 2.49
KCNA3P22001 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KCNA3P22001 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.62■■■□□ 2.49
KCNA3P22001 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.62■■■□□ 2.49
KCNA3P22001 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KCNA3P22001 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.61■■■□□ 2.49
KCNA3P22001 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.61■■■□□ 2.49
KCNA3P22001 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KCNA3P22001 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNA3P22001 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KCNA3P22001 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms