Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
APPP05067 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
APPP05067 ABHD17AP5-201ENST00000580133 923 ntBASIC29.41■■■□□ 2.3
APPP05067 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
APPP05067 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.41■■■□□ 2.3
APPP05067 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.4■■■□□ 2.3
APPP05067 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
APPP05067 AC025884.2-201ENST00000553429 711 ntBASIC29.4■■■□□ 2.3
APPP05067 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
APPP05067 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
APPP05067 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.39■■■□□ 2.3
APPP05067 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
APPP05067 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.39■■■□□ 2.3
APPP05067 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
APPP05067 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
APPP05067 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
APPP05067 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.39■■■□□ 2.29
APPP05067 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC29.38■■■□□ 2.29
APPP05067 AP004609.3-201ENST00000610705 1884 ntBASIC29.38■■■□□ 2.29
APPP05067 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
APPP05067 AC007029.1-201ENST00000604183 313 ntBASIC29.38■■■□□ 2.29
APPP05067 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
APPP05067 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.38■■■□□ 2.29
APPP05067 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
APPP05067 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
APPP05067 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.37■■■□□ 2.29
APPP05067 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
APPP05067 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
APPP05067 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
APPP05067 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
APPP05067 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
APPP05067 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
APPP05067 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
APPP05067 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
APPP05067 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.35■■■□□ 2.29
APPP05067 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.35■■■□□ 2.29
APPP05067 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
APPP05067 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.34■■■□□ 2.29
APPP05067 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
APPP05067 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
APPP05067 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
APPP05067 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
APPP05067 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.33■■■□□ 2.29
APPP05067 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.33■■■□□ 2.29
APPP05067 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.33■■■□□ 2.29
APPP05067 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
APPP05067 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
APPP05067 AC142472.1-201ENST00000612013 1741 ntBASIC29.32■■■□□ 2.28
APPP05067 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
APPP05067 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.32■■■□□ 2.28
APPP05067 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
APPP05067 MIR3960-201ENST00000583311 91 ntBASIC29.31■■■□□ 2.28
APPP05067 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
APPP05067 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
APPP05067 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.31■■■□□ 2.28
APPP05067 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
APPP05067 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
APPP05067 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
APPP05067 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
APPP05067 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
APPP05067 RP9P-202ENST00000450133 1212 ntBASIC29.3■■■□□ 2.28
APPP05067 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
APPP05067 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
APPP05067 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
APPP05067 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.29■■■□□ 2.28
APPP05067 U85056.1-201ENST00000616429 682 ntBASIC29.29■■■□□ 2.28
APPP05067 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.28■■■□□ 2.28
APPP05067 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
APPP05067 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
APPP05067 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
APPP05067 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
APPP05067 AC093536.1-201ENST00000569153 554 ntBASIC29.27■■■□□ 2.28
APPP05067 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
APPP05067 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
APPP05067 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
APPP05067 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.26■■■□□ 2.27
APPP05067 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.26■■■□□ 2.27
APPP05067 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
APPP05067 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
APPP05067 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
APPP05067 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
APPP05067 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
APPP05067 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
APPP05067 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.25■■■□□ 2.27
APPP05067 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
APPP05067 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
APPP05067 NTF6A-201ENST00000591175 560 ntBASIC29.25■■■□□ 2.27
APPP05067 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
APPP05067 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.25■■■□□ 2.27
APPP05067 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
APPP05067 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.24■■■□□ 2.27
APPP05067 AL121749.1-202ENST00000609313 2153 ntBASIC29.24■■■□□ 2.27
APPP05067 AC133552.2-201ENST00000619106 1032 ntBASIC29.24■■■□□ 2.27
APPP05067 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
APPP05067 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.23■■■□□ 2.27
APPP05067 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.23■■■□□ 2.27
APPP05067 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
APPP05067 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.23■■■□□ 2.27
APPP05067 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
APPP05067 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms