Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
C4BPAP04003 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.56■■□□□ 1.84
C4BPAP04003 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
C4BPAP04003 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
C4BPAP04003 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
C4BPAP04003 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
C4BPAP04003 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
C4BPAP04003 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
C4BPAP04003 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
C4BPAP04003 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
C4BPAP04003 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.54■■□□□ 1.84
C4BPAP04003 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.54■■□□□ 1.84
C4BPAP04003 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.53■■□□□ 1.84
C4BPAP04003 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.53■■□□□ 1.84
C4BPAP04003 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
C4BPAP04003 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
C4BPAP04003 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
C4BPAP04003 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
C4BPAP04003 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
C4BPAP04003 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
C4BPAP04003 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
C4BPAP04003 ECEL1P2-201ENST00000461596 1295 ntBASIC26.52■■□□□ 1.84
C4BPAP04003 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.52■■□□□ 1.84
C4BPAP04003 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
C4BPAP04003 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.51■■□□□ 1.83
C4BPAP04003 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.51■■□□□ 1.83
C4BPAP04003 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
C4BPAP04003 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
C4BPAP04003 AC025884.2-201ENST00000553429 711 ntBASIC26.5■■□□□ 1.83
C4BPAP04003 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.49■■□□□ 1.83
C4BPAP04003 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
C4BPAP04003 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.49■■□□□ 1.83
C4BPAP04003 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
C4BPAP04003 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.49■■□□□ 1.83
C4BPAP04003 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
C4BPAP04003 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
C4BPAP04003 HSD17B1P1-201ENST00000590052 955 ntBASIC26.48■■□□□ 1.83
C4BPAP04003 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
C4BPAP04003 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.48■■□□□ 1.83
C4BPAP04003 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.48■■□□□ 1.83
C4BPAP04003 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
C4BPAP04003 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
C4BPAP04003 SMPD5-203ENST00000639008 1464 ntBASIC26.46■■□□□ 1.83
C4BPAP04003 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.46■■□□□ 1.83
C4BPAP04003 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
C4BPAP04003 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
C4BPAP04003 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
C4BPAP04003 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
C4BPAP04003 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.45■■□□□ 1.83
C4BPAP04003 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
C4BPAP04003 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.45■■□□□ 1.82
C4BPAP04003 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.45■■□□□ 1.82
C4BPAP04003 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
C4BPAP04003 RNF126P1-201ENST00000567452 1320 ntBASIC26.44■■□□□ 1.82
C4BPAP04003 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
C4BPAP04003 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.44■■□□□ 1.82
C4BPAP04003 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
C4BPAP04003 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
C4BPAP04003 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
C4BPAP04003 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.43■■□□□ 1.82
C4BPAP04003 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.43■■□□□ 1.82
C4BPAP04003 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.43■■□□□ 1.82
C4BPAP04003 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
C4BPAP04003 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
C4BPAP04003 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.42■■□□□ 1.82
C4BPAP04003 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
C4BPAP04003 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.42■■□□□ 1.82
C4BPAP04003 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
C4BPAP04003 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
C4BPAP04003 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.41■■□□□ 1.82
C4BPAP04003 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.41■■□□□ 1.82
C4BPAP04003 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
C4BPAP04003 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.41■■□□□ 1.82
C4BPAP04003 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.41■■□□□ 1.82
C4BPAP04003 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.4■■□□□ 1.82
C4BPAP04003 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
C4BPAP04003 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.4■■□□□ 1.82
C4BPAP04003 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.4■■□□□ 1.82
C4BPAP04003 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
C4BPAP04003 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.39■■□□□ 1.82
C4BPAP04003 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.39■■□□□ 1.82
C4BPAP04003 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.39■■□□□ 1.82
C4BPAP04003 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.39■■□□□ 1.82
C4BPAP04003 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.39■■□□□ 1.82
C4BPAP04003 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
C4BPAP04003 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
C4BPAP04003 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
C4BPAP04003 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
C4BPAP04003 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms