Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MT-ND4P03905 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-ND4P03905 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND4P03905 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.18■□□□□ 0.98
MT-ND4P03905 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND4P03905 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND4P03905 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND4P03905 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MT-ND4P03905 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND4P03905 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.16■□□□□ 0.98
MT-ND4P03905 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.16■□□□□ 0.98
MT-ND4P03905 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND4P03905 AL162393.1-201ENST00000437852 946 ntBASIC21.15■□□□□ 0.98
MT-ND4P03905 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.15■□□□□ 0.98
MT-ND4P03905 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND4P03905 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MT-ND4P03905 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MT-ND4P03905 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND4P03905 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND4P03905 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND4P03905 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND4P03905 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.14■□□□□ 0.97
MT-ND4P03905 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.14■□□□□ 0.97
MT-ND4P03905 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4P03905 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4P03905 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4P03905 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.13■□□□□ 0.97
MT-ND4P03905 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.13■□□□□ 0.97
MT-ND4P03905 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
MT-ND4P03905 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4P03905 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MT-ND4P03905 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND4P03905 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.12■□□□□ 0.97
MT-ND4P03905 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND4P03905 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MT-ND4P03905 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND4P03905 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.11■□□□□ 0.97
MT-ND4P03905 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND4P03905 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND4P03905 AP004609.3-201ENST00000610705 1884 ntBASIC21.11■□□□□ 0.97
MT-ND4P03905 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.11■□□□□ 0.97
MT-ND4P03905 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND4P03905 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-ND4P03905 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND4P03905 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND4P03905 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND4P03905 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND4P03905 AC044849.2-201ENST00000606596 710 ntBASIC21.1■□□□□ 0.97
MT-ND4P03905 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND4P03905 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
MT-ND4P03905 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND4P03905 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND4P03905 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND4P03905 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.09■□□□□ 0.97
MT-ND4P03905 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND4P03905 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MT-ND4P03905 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND4P03905 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND4P03905 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.08■□□□□ 0.97
MT-ND4P03905 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.08■□□□□ 0.97
MT-ND4P03905 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MT-ND4P03905 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.08■□□□□ 0.97
MT-ND4P03905 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
MT-ND4P03905 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND4P03905 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND4P03905 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND4P03905 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND4P03905 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MT-ND4P03905 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MT-ND4P03905 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND4P03905 AC133561.1-201ENST00000568600 2415 ntBASIC21.05■□□□□ 0.96
MT-ND4P03905 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MT-ND4P03905 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.04■□□□□ 0.96
MT-ND4P03905 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.04■□□□□ 0.96
MT-ND4P03905 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND4P03905 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.04■□□□□ 0.96
MT-ND4P03905 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND4P03905 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.04■□□□□ 0.96
MT-ND4P03905 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND4P03905 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
MT-ND4P03905 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND4P03905 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MT-ND4P03905 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND4P03905 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND4P03905 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND4P03905 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MT-ND4P03905 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
MT-ND4P03905 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MT-ND4P03905 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND4P03905 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND4P03905 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms