Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
BEST1O76090 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
BEST1O76090 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
BEST1O76090 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.97■■□□□ 1.75
BEST1O76090 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.97■■□□□ 1.75
BEST1O76090 U85056.1-201ENST00000616429 682 ntBASIC25.97■■□□□ 1.75
BEST1O76090 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.97■■□□□ 1.75
BEST1O76090 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BEST1O76090 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
BEST1O76090 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
BEST1O76090 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
BEST1O76090 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
BEST1O76090 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
BEST1O76090 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
BEST1O76090 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
BEST1O76090 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.94■■□□□ 1.74
BEST1O76090 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
BEST1O76090 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
BEST1O76090 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
BEST1O76090 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
BEST1O76090 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
BEST1O76090 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
BEST1O76090 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.92■■□□□ 1.74
BEST1O76090 AP004609.3-201ENST00000610705 1884 ntBASIC25.92■■□□□ 1.74
BEST1O76090 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.92■■□□□ 1.74
BEST1O76090 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
BEST1O76090 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.92■■□□□ 1.74
BEST1O76090 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
BEST1O76090 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
BEST1O76090 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
BEST1O76090 NTF6A-201ENST00000591175 560 ntBASIC25.91■■□□□ 1.74
BEST1O76090 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
BEST1O76090 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
BEST1O76090 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
BEST1O76090 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
BEST1O76090 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
BEST1O76090 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.9■■□□□ 1.74
BEST1O76090 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
BEST1O76090 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
BEST1O76090 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
BEST1O76090 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
BEST1O76090 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
BEST1O76090 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BEST1O76090 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
BEST1O76090 AC142472.1-201ENST00000612013 1741 ntBASIC25.89■■□□□ 1.74
BEST1O76090 RP9P-202ENST00000450133 1212 ntBASIC25.89■■□□□ 1.74
BEST1O76090 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BEST1O76090 AC009831.1-201ENST00000580420 1582 ntBASIC25.89■■□□□ 1.73
BEST1O76090 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BEST1O76090 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BEST1O76090 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BEST1O76090 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.88■■□□□ 1.73
BEST1O76090 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.88■■□□□ 1.73
BEST1O76090 AC093536.1-201ENST00000569153 554 ntBASIC25.88■■□□□ 1.73
BEST1O76090 AC026202.3-201ENST00000600805 1127 ntBASIC25.88■■□□□ 1.73
BEST1O76090 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.88■■□□□ 1.73
BEST1O76090 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
BEST1O76090 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
BEST1O76090 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
BEST1O76090 MIR3960-201ENST00000583311 91 ntBASIC25.87■■□□□ 1.73
BEST1O76090 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
BEST1O76090 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
BEST1O76090 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
BEST1O76090 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
BEST1O76090 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.86■■□□□ 1.73
BEST1O76090 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
BEST1O76090 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.86■■□□□ 1.73
BEST1O76090 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
BEST1O76090 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.85■■□□□ 1.73
BEST1O76090 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.85■■□□□ 1.73
BEST1O76090 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BEST1O76090 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.85■■□□□ 1.73
BEST1O76090 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.85■■□□□ 1.73
BEST1O76090 AC133552.2-201ENST00000619106 1032 ntBASIC25.85■■□□□ 1.73
BEST1O76090 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.85■■□□□ 1.73
BEST1O76090 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
BEST1O76090 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
BEST1O76090 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BEST1O76090 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
BEST1O76090 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
BEST1O76090 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
BEST1O76090 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.83■■□□□ 1.73
BEST1O76090 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
BEST1O76090 KRT18P60-201ENST00000312876 1297 ntBASIC25.83■■□□□ 1.73
BEST1O76090 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
BEST1O76090 AL121749.1-202ENST00000609313 2153 ntBASIC25.83■■□□□ 1.73
BEST1O76090 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.83■■□□□ 1.72
BEST1O76090 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
BEST1O76090 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.82■■□□□ 1.72
BEST1O76090 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BEST1O76090 RAP2CP1-202ENST00000605179 643 ntBASIC25.82■■□□□ 1.72
BEST1O76090 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
BEST1O76090 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
BEST1O76090 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BEST1O76090 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
BEST1O76090 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
BEST1O76090 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BEST1O76090 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
BEST1O76090 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
BEST1O76090 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms