Protein–RNA interactions for Protein: O75074

LRP3, Low-density lipoprotein receptor-related protein 3, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3O75074 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.43■■□□□ 1.5
LRP3O75074 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.43■■□□□ 1.5
LRP3O75074 KRT125P-201ENST00000546827 989 ntBASIC24.43■■□□□ 1.5
LRP3O75074 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LRP3O75074 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.42■■□□□ 1.5
LRP3O75074 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.42■■□□□ 1.5
LRP3O75074 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
LRP3O75074 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
LRP3O75074 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRP3O75074 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.4■■□□□ 1.5
LRP3O75074 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRP3O75074 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRP3O75074 LONRF2P2-201ENST00000439212 571 ntBASIC24.4■■□□□ 1.5
LRP3O75074 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.4■■□□□ 1.5
LRP3O75074 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
LRP3O75074 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LRP3O75074 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LRP3O75074 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
LRP3O75074 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.39■■□□□ 1.49
LRP3O75074 AL139246.5-201ENST00000606645 996 ntBASIC24.39■■□□□ 1.49
LRP3O75074 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.38■■□□□ 1.49
LRP3O75074 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRP3O75074 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRP3O75074 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRP3O75074 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRP3O75074 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.37■■□□□ 1.49
LRP3O75074 AC087393.1-201ENST00000582896 145 ntBASIC24.37■■□□□ 1.49
LRP3O75074 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRP3O75074 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRP3O75074 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.36■■□□□ 1.49
LRP3O75074 MIR4787-201ENST00000607364 84 ntBASIC24.36■■□□□ 1.49
LRP3O75074 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.35■■□□□ 1.49
LRP3O75074 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRP3O75074 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRP3O75074 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.35■■□□□ 1.49
LRP3O75074 BX664725.1-201ENST00000438252 379 ntBASIC24.35■■□□□ 1.49
LRP3O75074 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.35■■□□□ 1.49
LRP3O75074 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRP3O75074 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRP3O75074 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRP3O75074 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
LRP3O75074 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.34■■□□□ 1.49
LRP3O75074 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.34■■□□□ 1.49
LRP3O75074 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LRP3O75074 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRP3O75074 KRT16P3-201ENST00000439127 1283 ntBASIC24.32■■□□□ 1.48
LRP3O75074 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.32■■□□□ 1.48
LRP3O75074 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.31■■□□□ 1.48
LRP3O75074 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
LRP3O75074 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.31■■□□□ 1.48
LRP3O75074 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.31■■□□□ 1.48
LRP3O75074 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRP3O75074 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRP3O75074 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
LRP3O75074 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
LRP3O75074 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
LRP3O75074 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LRP3O75074 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
LRP3O75074 UNC93B8-201ENST00000511903 705 ntBASIC24.29■■□□□ 1.48
LRP3O75074 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRP3O75074 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRP3O75074 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.28■■□□□ 1.48
LRP3O75074 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
LRP3O75074 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LRP3O75074 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.28■■□□□ 1.48
LRP3O75074 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRP3O75074 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.28■■□□□ 1.48
LRP3O75074 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRP3O75074 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRP3O75074 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRP3O75074 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
LRP3O75074 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRP3O75074 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRP3O75074 AC022616.5-201ENST00000518796 181 ntBASIC24.26■■□□□ 1.47
LRP3O75074 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.26■■□□□ 1.47
LRP3O75074 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.25■■□□□ 1.47
LRP3O75074 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRP3O75074 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.25■■□□□ 1.47
LRP3O75074 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.25■■□□□ 1.47
LRP3O75074 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LRP3O75074 RPS2P7-201ENST00000447334 885 ntBASIC24.24■■□□□ 1.47
LRP3O75074 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRP3O75074 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.24■■□□□ 1.47
LRP3O75074 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRP3O75074 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.23■■□□□ 1.47
LRP3O75074 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.23■■□□□ 1.47
LRP3O75074 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.23■■□□□ 1.47
LRP3O75074 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.23■■□□□ 1.47
LRP3O75074 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LRP3O75074 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LRP3O75074 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRP3O75074 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRP3O75074 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.22■■□□□ 1.47
LRP3O75074 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRP3O75074 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRP3O75074 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRP3O75074 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRP3O75074 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LRP3O75074 AC100797.4-201ENST00000631653 1827 ntBASIC24.21■■□□□ 1.47
LRP3O75074 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms