Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01548A6NM66 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LINC01548A6NM66 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01548A6NM66 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LINC01548A6NM66 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LINC01548A6NM66 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01548A6NM66 AP004609.3-201ENST00000610705 1884 ntBASIC19.42■□□□□ 0.7
LINC01548A6NM66 AC025884.2-201ENST00000553429 711 ntBASIC19.42■□□□□ 0.7
LINC01548A6NM66 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01548A6NM66 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01548A6NM66 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01548A6NM66 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01548A6NM66 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LINC01548A6NM66 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01548A6NM66 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LINC01548A6NM66 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01548A6NM66 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01548A6NM66 AL121749.1-202ENST00000609313 2153 ntBASIC19.4■□□□□ 0.7
LINC01548A6NM66 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01548A6NM66 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01548A6NM66 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01548A6NM66 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01548A6NM66 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LINC01548A6NM66 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
LINC01548A6NM66 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01548A6NM66 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LINC01548A6NM66 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01548A6NM66 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC01548A6NM66 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01548A6NM66 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01548A6NM66 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC01548A6NM66 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC01548A6NM66 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01548A6NM66 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01548A6NM66 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01548A6NM66 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 AC007029.1-201ENST00000604183 313 ntBASIC19.37■□□□□ 0.69
LINC01548A6NM66 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LINC01548A6NM66 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01548A6NM66 AC142472.1-201ENST00000612013 1741 ntBASIC19.37■□□□□ 0.69
LINC01548A6NM66 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC01548A6NM66 ABHD17AP5-201ENST00000580133 923 ntBASIC19.36■□□□□ 0.69
LINC01548A6NM66 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01548A6NM66 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LINC01548A6NM66 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.35■□□□□ 0.69
LINC01548A6NM66 U85056.1-201ENST00000616429 682 ntBASIC19.35■□□□□ 0.69
LINC01548A6NM66 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LINC01548A6NM66 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.35■□□□□ 0.69
LINC01548A6NM66 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01548A6NM66 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LINC01548A6NM66 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LINC01548A6NM66 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01548A6NM66 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01548A6NM66 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.34■□□□□ 0.69
LINC01548A6NM66 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01548A6NM66 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01548A6NM66 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LINC01548A6NM66 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC01548A6NM66 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
LINC01548A6NM66 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.33■□□□□ 0.69
LINC01548A6NM66 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.33■□□□□ 0.69
LINC01548A6NM66 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC01548A6NM66 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01548A6NM66 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01548A6NM66 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01548A6NM66 RP9P-202ENST00000450133 1212 ntBASIC19.32■□□□□ 0.68
LINC01548A6NM66 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LINC01548A6NM66 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.32■□□□□ 0.68
LINC01548A6NM66 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC01548A6NM66 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01548A6NM66 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01548A6NM66 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.31■□□□□ 0.68
LINC01548A6NM66 AC093536.1-201ENST00000569153 554 ntBASIC19.31■□□□□ 0.68
LINC01548A6NM66 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01548A6NM66 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01548A6NM66 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01548A6NM66 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01548A6NM66 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01548A6NM66 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LINC01548A6NM66 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01548A6NM66 MIR3960-201ENST00000583311 91 ntBASIC19.3■□□□□ 0.68
LINC01548A6NM66 AC026202.3-201ENST00000600805 1127 ntBASIC19.3■□□□□ 0.68
LINC01548A6NM66 AC009831.1-201ENST00000580420 1582 ntBASIC19.3■□□□□ 0.68
LINC01548A6NM66 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01548A6NM66 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms