Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.48■■■□□ 2.31
TMEM88BA6NKF7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TMEM88BA6NKF7 KRT16P3-201ENST00000439127 1283 ntBASIC29.47■■■□□ 2.31
TMEM88BA6NKF7 UNC93B8-201ENST00000511903 705 ntBASIC29.47■■■□□ 2.31
TMEM88BA6NKF7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.47■■■□□ 2.31
TMEM88BA6NKF7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TMEM88BA6NKF7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
TMEM88BA6NKF7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TMEM88BA6NKF7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TMEM88BA6NKF7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TMEM88BA6NKF7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TMEM88BA6NKF7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TMEM88BA6NKF7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
TMEM88BA6NKF7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC29.44■■■□□ 2.3
TMEM88BA6NKF7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
TMEM88BA6NKF7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
TMEM88BA6NKF7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
TMEM88BA6NKF7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.43■■■□□ 2.3
TMEM88BA6NKF7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC29.43■■■□□ 2.3
TMEM88BA6NKF7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TMEM88BA6NKF7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
TMEM88BA6NKF7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
TMEM88BA6NKF7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.42■■■□□ 2.3
TMEM88BA6NKF7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TMEM88BA6NKF7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TMEM88BA6NKF7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.41■■■□□ 2.3
TMEM88BA6NKF7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.41■■■□□ 2.3
TMEM88BA6NKF7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 BX664725.1-201ENST00000438252 379 ntBASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC29.4■■■□□ 2.3
TMEM88BA6NKF7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
TMEM88BA6NKF7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.39■■■□□ 2.3
TMEM88BA6NKF7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
TMEM88BA6NKF7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
TMEM88BA6NKF7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
TMEM88BA6NKF7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
TMEM88BA6NKF7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.36■■■□□ 2.29
TMEM88BA6NKF7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TMEM88BA6NKF7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.35■■■□□ 2.29
TMEM88BA6NKF7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
TMEM88BA6NKF7 AL135925.1-201ENST00000605920 1701 ntBASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 AC087393.1-201ENST00000582896 145 ntBASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 AC005837.3-201ENST00000612163 286 ntBASIC29.34■■■□□ 2.29
TMEM88BA6NKF7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.33■■■□□ 2.29
TMEM88BA6NKF7 AC131281.2-201ENST00000520478 145 ntBASIC29.32■■■□□ 2.28
TMEM88BA6NKF7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.31■■■□□ 2.28
TMEM88BA6NKF7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TMEM88BA6NKF7 AC110285.6-201ENST00000617652 491 ntBASIC29.29■■■□□ 2.28
TMEM88BA6NKF7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TMEM88BA6NKF7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
TMEM88BA6NKF7 AL136116.3-201ENST00000402907 1138 ntBASIC29.27■■■□□ 2.28
TMEM88BA6NKF7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TMEM88BA6NKF7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
TMEM88BA6NKF7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.26■■■□□ 2.27
TMEM88BA6NKF7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC29.26■■■□□ 2.27
TMEM88BA6NKF7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
TMEM88BA6NKF7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TMEM88BA6NKF7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
TMEM88BA6NKF7 TSPY9P-201ENST00000440215 945 ntBASIC29.24■■■□□ 2.27
TMEM88BA6NKF7 TSPY11P-201ENST00000442607 1045 ntBASIC29.24■■■□□ 2.27
TMEM88BA6NKF7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.24■■■□□ 2.27
TMEM88BA6NKF7 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.24■■■□□ 2.27
TMEM88BA6NKF7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TMEM88BA6NKF7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
TMEM88BA6NKF7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TMEM88BA6NKF7 RARRES2P6-201ENST00000567333 442 ntBASIC29.23■■■□□ 2.27
TMEM88BA6NKF7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.23■■■□□ 2.27
TMEM88BA6NKF7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
TMEM88BA6NKF7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
TMEM88BA6NKF7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.21■■■□□ 2.27
TMEM88BA6NKF7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TMEM88BA6NKF7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
TMEM88BA6NKF7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.2■■■□□ 2.26
TMEM88BA6NKF7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
TMEM88BA6NKF7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
TMEM88BA6NKF7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
TMEM88BA6NKF7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TMEM88BA6NKF7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TMEM88BA6NKF7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.18■■■□□ 2.26
TMEM88BA6NKF7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.18■■■□□ 2.26
TMEM88BA6NKF7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TMEM88BA6NKF7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms